RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 DENND5BQ6ZUT9 1274 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 DNAJB7Q7Z6W7 309 aaPredicted RBP13.96□□□□□ -0.17
HDAC1-208ENST00000482310 PHLDB2Q86SQ0 1253 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 NUP93Q8N1F7 819 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 SLC30A5Q8TAD4 765 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 HDAC7Q8WUI4 952 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 NDRG1Q92597 394 aaKnown RBP13.96□□□□□ -0.17
HDAC1-208ENST00000482310 C8orf48Q96LL4 319 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 PCDHB18PQ96TA0 734 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 DNAJC7Q99615 494 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 PRKD2Q9BZL6 878 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 MIS12Q9H081 205 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 DEF6Q9H4E7 631 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 SYNCQ9H7C4 482 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 CSNK1G1Q9HCP0 422 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 TJP2Q9UDY2 1190 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 CD207Q9UJ71 328 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 MAFFQ9ULX9 164 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 PCDHGC3Q9UN70 934 aa13.96□□□□□ -0.17
HDAC1-208ENST00000482310 HHLA1C9JL84 531 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 HNRNPA1P09651 372 aaKnown RBP eCLIP13.95□□□□□ -0.18
HDAC1-208ENST00000482310 CSH1P0DML2 217 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 CSH2P0DML3 217 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 EIF4A3P38919 411 aaKnown RBP13.95□□□□□ -0.18
HDAC1-208ENST00000482310 GPD2P43304 727 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 TKTL1P51854 596 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 TFF2Q03403 129 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 PDCLQ13371 301 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 PKDCCQ504Y2 493 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 HGSNATQ68CP4 663 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 CES5AQ6NT32 575 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 WDR59Q6PJI9 974 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 TMEM184AQ6ZMB5 413 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 ITIH5Q86UX2 942 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 ZNF677Q86XU0 584 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 FMNL3Q8IVF7 1028 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 SIX6OS1Q8N1H7 587 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 WDTC1Q8N5D0 677 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 TMEM35BQ8NCS4 154 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 CLEC4CQ8WTT0 213 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 ING5Q8WYH8 240 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 HLA-CQ95604 372 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 FBXO32Q969P5 355 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 PSMG2Q969U7 264 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 SPATA17Q96L03 361 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 CHP1Q99653 195 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 LRRC4Q9HBW1 653 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 ASAH2Q9NR71 780 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 ARHGAP20Q9P2F6 1191 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 DNMT3BQ9UBC3 853 aaKnown RBP13.95□□□□□ -0.18
HDAC1-208ENST00000482310 HSFX1Q9UBD0 423 aa13.95□□□□□ -0.18
HDAC1-208ENST00000482310 E5RJQ4 531 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 NRG2O14511 850 aaPredicted RBP13.94□□□□□ -0.18
HDAC1-208ENST00000482310 RHOP08100 348 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 USP17L7P0C7H9 530 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 HOXB8P17481 243 aaPredicted RBP13.94□□□□□ -0.18
HDAC1-208ENST00000482310 PTPN2P17706 415 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 GABRR2P28476 465 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 HOXA9P31269 272 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 PRKCIP41743 596 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 PLA2G4AP47712 749 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 NOMO3P69849 1222 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 CYP4F8P98187 520 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 CLEC16AQ2KHT3 1053 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 PABPC1LQ4VXU2 614 aaKnown RBP13.94□□□□□ -0.18
HDAC1-208ENST00000482310 PDZD4Q76G19 769 aaPredicted RBP13.94□□□□□ -0.18
HDAC1-208ENST00000482310 GET4Q7L5D6 327 aaPredicted RBP13.94□□□□□ -0.18
HDAC1-208ENST00000482310 CCDC186Q7Z3E2 898 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 SLC35F5Q8WV83 523 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 SYN2Q92777 582 aaPredicted RBP13.94□□□□□ -0.18
HDAC1-208ENST00000482310 TCEAL4Q96EI5 215 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 MSLNLQ96KJ4 702 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 PPP1R13BQ96KQ4 1090 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 CPXM1Q96SM3 734 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 ULBP1Q9BZM6 244 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 TAS2R14Q9NYV8 317 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 GMIPQ9P107 970 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 IMPACTQ9P2X3 320 aa13.94□□□□□ -0.18
HDAC1-208ENST00000482310 A0A1W2PRU2 124 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 TNFRSF10AO00220 468 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 DDX3XO00571 662 aaKnown RBP eCLIP13.93□□□□□ -0.18
HDAC1-208ENST00000482310 TNFRSF10BO14763 440 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 GABBR2O75899 941 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 RTN3O95197 1032 aaPredicted RBP13.93□□□□□ -0.18
HDAC1-208ENST00000482310 C1RP00736 705 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 ERBB2P04626 1255 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 PTMAP06454 111 aaKnown RBP13.93□□□□□ -0.18
HDAC1-208ENST00000482310 HMGA1P17096 107 aaKnown RBP13.93□□□□□ -0.18
HDAC1-208ENST00000482310 YWHAQP27348 245 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 CCR2P41597 374 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 NSFP46459 744 aaKnown RBP13.93□□□□□ -0.18
HDAC1-208ENST00000482310 TAF10Q12962 218 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 COL19A1Q14993 1142 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 SLC5A9Q2M3M2 681 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 PTPN20Q4JDL3 420 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 MMS22LQ6ZRQ5 1243 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 GPR149Q86SP6 731 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 VPS36Q86VN1 386 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 TMC8Q8IU68 726 aa13.93□□□□□ -0.18
HDAC1-208ENST00000482310 OLIG1Q8TAK6 271 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms