RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 ZXDBP98169 803 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 TAF10Q12962 218 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 USP4Q13107 963 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 EML3Q32P44 896 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 C1orf220Q5T0J3 134 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 CEP68Q76N32 757 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 CAMKK1Q8N5S9 505 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 TAF4BQ92750 862 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 MED10Q9BTT4 135 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 SCAND2PQ9GZW5 306 aaPredicted RBP14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 SDCBP2Q9H190 292 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 LINC00597Q9H2U6 94 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 GDPD2Q9HCC8 539 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 WNT6Q9Y6F9 365 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 ATP8B3O60423 1300 aa14.3□□□□□ -0.12
CTDSP1-208ENST00000482272 RIF1Q5UIP0 2472 aaKnown RBP14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 CCDC163A0A0D9SF12 145 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 LEFTY2O00292 366 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 LRP3O75074 770 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 RNF40O75150 1001 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 YWHAQP27348 245 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 RAP1GAPP47736 663 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 SLC7A9P82251 487 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 SPEM2Q0P670 501 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 IFRD2Q12894 506 aaPredicted RBP14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 CEP135Q66GS9 1140 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 PKN3Q6P5Z2 889 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 KIAA1958Q8N8K9 716 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 PDZD8Q8NEN9 1154 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 TMC2Q8TDI7 906 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 ZNF518BQ9C0D4 1074 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 RNF38Q9H0F5 515 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 SMYD3Q9H7B4 428 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 FBRSL1Q9HCM7 1045 aaKnown RBP14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 TRAF3IP3Q9Y228 551 aa14.29□□□□□ -0.12
CTDSP1-208ENST00000482272 CLDN5O00501 218 aa14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 SLC9A3R1O14745 358 aaPredicted RBP14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 TRIM21P19474 475 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 TGM1P22735 817 aa14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 SRSF5Q13243 272 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 ZACNQ401N2 412 aa14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 GVINP1Q7Z2Y8 2422 aa14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 DDX42Q86XP3 938 aaKnown RBP eCLIP14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 ADGRG2Q8IZP9 1017 aa14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 OVCA2Q8WZ82 227 aa14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 CCDC34Q96HJ3 373 aa14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 KCNK16Q96T55 309 aa14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 POLR3BQ9NW08 1133 aaPredicted RBP14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 COMMD8Q9NX08 183 aa14.28□□□□□ -0.12
CTDSP1-208ENST00000482272 ANTXRLA6NF34 631 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 MAPK13O15264 365 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 FOXD2O60548 495 aaPredicted RBP14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 RHOBTB3O94955 611 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 OLFM2O95897 454 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 OAS1P00973 400 aaKnown RBP14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 MBL2P11226 248 aaPredicted RBP14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 RPL13P26373 211 aaKnown RBP14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 DPYDQ12882 1025 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 PAQR9Q6ZVX9 377 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 SV2AQ7L0J3 742 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 SYT13Q7L8C5 426 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 UNC93AQ86WB7 457 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 CRYBG2Q8N1P7 616 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 RPLP0P6Q8NHW5 317 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 GAB3Q8WWW8 586 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 EZH1Q92800 747 aaPredicted RBP14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 FBXO32Q969P5 355 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 ACDQ96AP0 544 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 SMARCD1Q96GM5 515 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 SEMA4GQ9NTN9 838 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 TBC1D14Q9P2M4 693 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 HMGXB4Q9UGU5 601 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 CHORDC1Q9UHD1 332 aaPredicted RBP14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 CDV3Q9UKY7 258 aaKnown RBP14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 CPQQ9Y646 472 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 OTOGLQ3ZCN5 2332 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 EML5Q05BV3 1969 aa14.27□□□□□ -0.13
CTDSP1-208ENST00000482272 A0A1W2PQ27 194 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 A0A1W2PQ64 194 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 A0A1W2PQD8 194 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 RPP40O75818 363 aaKnown RBP14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 CCDC192P0DO97 292 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 KRT13P13646 458 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 NR2F2P24468 414 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 PXNP49023 591 aaPredicted RBP14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 VAMP7P51809 220 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 ATXN1P54253 815 aaKnown RBP14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 ORC1Q13415 861 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 CSRP2Q16527 193 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 NFIL3Q16649 462 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 SPOPLQ6IQ16 392 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 SCARA5Q6ZMJ2 495 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 KRBA2Q6ZNG9 492 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 INTS8Q75QN2 995 aaKnown RBP14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 CACNA2D4Q7Z3S7 1137 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 FILIP1Q7Z7B0 1213 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 ACOT1Q86TX2 421 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 FAM35AQ86V20 835 aa14.26□□□□□ -0.13
CTDSP1-208ENST00000482272 FAM160A2Q8N612 972 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms