RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ARFIP1P53367 373 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 RAC3P60763 192 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 PPP2CBP62714 309 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 PPP2CAP67775 309 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 ZNF543Q08ER8 600 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 SGCGQ13326 291 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 CUL4AQ13619 759 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 WTAPQ15007 396 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 ANKRD1Q15327 319 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 CNN3Q15417 329 aaKnown RBP4.51□□□□□ -1.69
VPS41-212ENST00000482217 TSTQ16762 297 aaKnown RBP4.51□□□□□ -1.69
VPS41-212ENST00000482217 PFKFB4Q16877 469 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 GPR139Q6DWJ6 353 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 APOA5Q6Q788 366 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 IL27RAQ6UWB1 636 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 ZNF783Q6ZMS7 281 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 Q6ZVL8 140 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 BEND5Q7L4P6 421 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 PPP1R42Q7Z4L9 355 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 CCDC91Q7Z6B0 441 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 SYTL1Q8IYJ3 562 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 CMTM4Q8IZR5 234 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 OR8H3Q8N146 312 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 NUP93Q8N1F7 819 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 CAMKK1Q8N5S9 505 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 ANKRD53Q8N9V6 530 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 MNS1Q8NEH6 495 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 OR7D4Q8NG98 312 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 OR2I1PQ8NGU4 316 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 OR14K1Q8NGZ2 314 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 MOSPD2Q8NHP6 518 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 CREB3L4Q8TEY5 395 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 HERVK_113Q902F9 699 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 CFHR4Q92496 578 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 DPF2Q92785 391 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 PHKBQ93100 1093 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 ZUFSPQ96AP4 578 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 C1GALT1C1Q96EU7 318 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 MVB12AQ96EY5 273 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 ZNF845Q96IR2 970 aaPredicted RBP4.51□□□□□ -1.69
VPS41-212ENST00000482217 FNBP1Q96RU3 617 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 WDR24Q96S15 920 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 BRIP1Q9BX63 1249 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 NUP62CLQ9H1M0 184 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 OR10A4Q9H209 315 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 ADAM7Q9H2U9 754 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 GJB4Q9NTQ9 266 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 GPRC5DQ9NZD1 345 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 LRFN1Q9P244 771 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 KIF17Q9P2E2 1029 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.51□□□□□ -1.69
VPS41-212ENST00000482217 TRPS1Q9UHF7 1281 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 RPS6KA6Q9UK32 745 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 SLC13A4Q9UKG4 626 aa4.51□□□□□ -1.69
VPS41-212ENST00000482217 POM121BA6NF01 834 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 TRIM38O00635 465 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 SLC16A6O15403 523 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 FFAR2O15552 330 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 ITGA10O75578 1167 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 SOAT2O75908 522 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 HARSP12081 509 aaKnown RBP4.5□□□□□ -1.69
VPS41-212ENST00000482217 TSHRP16473 764 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 HSPA7P48741 367 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 PPP5CP53041 499 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 EPHB4P54760 987 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 CASP6P55212 293 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 PER3P56645 1201 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 C21orf58P58505 322 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 CDC42EP1Q00587 391 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 GBE1Q04446 702 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 TIGD6Q17RP2 521 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 MPEG1Q2M385 716 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 PGS1Q32NB8 556 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 C3orf36Q3SXR2 165 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 THEMIS2Q5TEJ8 643 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 KLHDC7AQ5VTJ3 777 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 WDR73Q6P4I2 378 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 SLC22A25Q6T423 547 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 KRT74Q7RTS7 529 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 TTC7BQ86TV6 843 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 MOGAT3Q86VF5 341 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 DENND1CQ8IV53 801 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 ANKRD35Q8N283 1001 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 LILRA3Q8N6C8 439 aaPredicted RBP4.5□□□□□ -1.69
VPS41-212ENST00000482217 OR10H5Q8NGA6 315 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 LRTOMTQ8WZ04 291 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 USP6NLQ92738 828 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 TEKT1Q969V4 418 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 NEIL1Q96FI4 390 aaPredicted RBP4.5□□□□□ -1.69
VPS41-212ENST00000482217 CLMNQ96JQ2 1002 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 RPL10LQ96L21 214 aaKnown RBP4.5□□□□□ -1.69
VPS41-212ENST00000482217 UHRF1Q96T88 793 aaPredicted RBP4.5□□□□□ -1.69
VPS41-212ENST00000482217 GPHA2Q96T91 129 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 LZTS2Q9BRK4 669 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 FSD1Q9BTV5 496 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 DDX23Q9BUQ8 820 aaKnown RBP4.5□□□□□ -1.69
VPS41-212ENST00000482217 CNPPD1Q9BV87 410 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 ENKD1Q9H0I2 346 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 NELFAQ9H3P2 528 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 OBP2BQ9NPH6 170 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms