RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	POC1B-GALNT4	F8VUJ3	575 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173		H7C1Q1	480 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	ERC2	O15083	957 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	USP1	O94782	785 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	CSF1R	P07333	972 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	HSPA6	P17066	643 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	HOXD9	P28356	352 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	NANOS2	P60321	138 aa	Known RBP	4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	CTBP1	Q13363	440 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	PIN1	Q13526	163 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	GTF2H3	Q13889	308 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	SERPINA13P	Q6UXR4	307 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173		Q6ZWC4	215 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	DAAM2	Q86T65	1068 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	DENND1C	Q8IV53	801 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	SLC15A3	Q8IY34	581 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	GALNT4	Q8N4A0	578 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	TERB1	Q8NA31	727 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	RP9	Q8TA86	221 aa	Known RBP	4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	SLC35G2	Q8TBE7	412 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	RAPGEF4	Q8WZA2	1011 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	FOXP1	Q9H334	677 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	PIH1D1	Q9NWS0	290 aa	Known RBP	4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	GABBR1	Q9UBS5	961 aa		4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.06	□□□□□ -1.76
CCNL1-223	ENST00000481173	LY6G6E	A0A0G2JKS1	128 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	CD8B2	A6NJW9	211 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	TMEM233	B4DJY2	109 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173		H3BML4	177 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	BTN3A1	O00481	513 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	TH	P07101	528 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	PDGFRB	P09619	1106 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	TMEM191B	P0C7N4	346 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	NPR1	P16066	1061 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	LRPAP1	P30533	357 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	THBS3	P49746	956 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	HTR6	P50406	440 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	ALDH5A1	P51649	535 aa	Predicted RBP	4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	L1TD1	Q5T7N2	865 aa	Known RBP	4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	B3GNT9	Q6UX72	402 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	DLK2	Q6UY11	383 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	DPY19L3	Q6ZPD9	716 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	MPP5	Q8N3R9	675 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	TMEM171	Q8WVE6	324 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	PPP2R3C	Q969Q6	453 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	PUS7	Q96PZ0	661 aa	Known RBP	4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	MESP1	Q9BRJ9	268 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	EFHD1	Q9BUP0	239 aa		4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173	ZMAT3	Q9HA38	289 aa	Known RBP	4.05	□□□□□ -1.76
CCNL1-223	ENST00000481173		A0A087WWL8	130 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173		A0A1W2PPL8	197 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	AP4M1	O00189	453 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	DSCR3	O14972	297 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	CYP19A1	P11511	503 aa	Predicted RBP	4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	CYP2C9	P11712	490 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	FPR3	P25089	353 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	PDE6C	P51160	858 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	RENBP	P51606	427 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	DGKE	P52429	567 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	ARFIP2	P53365	341 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	PRKAG1	P54619	331 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	TPTE	P56180	551 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	IGBP1	P78318	339 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	SATB1	Q01826	763 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	PTCHD3	Q3KNS1	767 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	MGAT5B	Q3V5L5	792 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	PLA1A	Q53H76	456 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	ZNF783	Q6ZMS7	281 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	CAND1	Q86VP6	1230 aa	Known RBP	4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	ABRA	Q8N0Z2	381 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	FAM177A1	Q8N128	213 aa	Predicted RBP	4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	ZBTB34	Q8NCN2	500 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	ABHD11	Q8NFV4	315 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	OSCP1	Q8WVF1	389 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	CUL5	Q93034	780 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	LENG8	Q96PV6	779 aa	Predicted RBP	4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	SNX18	Q96RF0	628 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	TAAR9	Q96RI9	348 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	DPCD	Q9BVM2	203 aa	Predicted RBP	4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	TRIM54	Q9BYV2	358 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	CIPC	Q9C0C6	399 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	NMRK2	Q9NPI5	230 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	SNX14	Q9Y5W7	946 aa		4.04	□□□□□ -1.76
CCNL1-223	ENST00000481173	UBE2Q2L	H0YL09	131 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	CHRM5	P08912	532 aa	Predicted RBP	4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	KCNA3	P22001	575 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	HTRA4	P83105	476 aa	Predicted RBP	4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	E2F1	Q01094	437 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	TBC1D25	Q3MII6	688 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	LEXM	Q3ZCV2	418 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	C10orf25	Q5T742	122 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	MEX3C	Q5U5Q3	659 aa	Known RBP	4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	NPNT	Q6UXI9	565 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	RAVER1	Q8IY67	606 aa	Known RBP	4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	IZUMO1	Q8IYV9	350 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	OR6B3	Q8NGW1	331 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms