RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 MON1AQ86VX9 555 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 TTC30AQ86WT1 665 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 NUP93Q8N1F7 819 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 USP13Q92995 863 aaPredicted RBP12.95□□□□□ -0.34
PTPRF-213ENST00000481019 ZFP14Q9HCL3 533 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 DMAP1Q9NPF5 467 aaPredicted RBP12.95□□□□□ -0.34
PTPRF-213ENST00000481019 SLC2A4RGQ9NR83 387 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 TAB2Q9NYJ8 693 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 IL37Q9NZH6 218 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 GCNT4Q9P109 453 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 ZDBF2Q9HCK1 2354 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 MYH10P35580 1976 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 ATP8B3O60423 1300 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 KIF26AQ9ULI4 1882 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-213ENST00000481019 ZNF840PA6NDX5 716 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 PRR33A8MZF0 331 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 FAM200BP0CF97 657 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 PON1P27169 355 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 ZNF132P52740 706 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 VCPP55072 806 aaKnown RBP12.94□□□□□ -0.34
PTPRF-213ENST00000481019 ZXDBP98169 803 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 MAN2A1Q16706 1144 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 VWA3BQ502W6 1294 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 ARHGAP15Q53QZ3 475 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 TCP11X2Q5H9J9 407 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 TRIM65Q6PJ69 517 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 TMEM270Q6UE05 265 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 CMTM8Q8IZV2 173 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 SIX5Q8N196 739 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 ARL14EPQ8N8R7 260 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-213ENST00000481019 ZFYVE19Q96K21 471 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 GCNAQ96QF7 691 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 TUBGCP2Q9BSJ2 902 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 DUSP16Q9BY84 665 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 GPR88Q9GZN0 384 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 TRPC7Q9HCX4 862 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 UBE2TQ9NPD8 197 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-213ENST00000481019 ACP6Q9NPH0 428 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 GMIPQ9P107 970 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 UXTQ9UBK9 157 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-213ENST00000481019 CHORDC1Q9UHD1 332 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-213ENST00000481019 PCDHB4Q9Y5E5 795 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 TICRRQ7Z2Z1 1910 aa12.94□□□□□ -0.34
PTPRF-213ENST00000481019 KMT2EQ8IZD2 1858 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 LRRC10BA6NIK2 292 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 ARNTLO00327 626 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 GABBR2O75899 941 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 ADCY5O95622 1261 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 ZNF18P17022 549 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 TBXAS1P24557 533 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-213ENST00000481019 BRD2P25440 801 aaKnown RBP12.93□□□□□ -0.34
PTPRF-213ENST00000481019 YWHAQP27348 245 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 WEE1P30291 646 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 GDI1P31150 447 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 UBASH3AP57075 661 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 GCNT1Q02742 428 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 KCNMA1Q12791 1236 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 KRT31Q15323 416 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 GOLGA7BQ2TAP0 167 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 ARHGAP17Q68EM7 881 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 CWF19L1Q69YN2 538 aaKnown RBP12.93□□□□□ -0.34
PTPRF-213ENST00000481019 GBP6Q6ZN66 633 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 MFSD6LQ8IWD5 586 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 RBBP8NLQ8NC74 664 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-213ENST00000481019 UBA3Q8TBC4 463 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 MRPS31Q92665 395 aaKnown RBP12.93□□□□□ -0.34
PTPRF-213ENST00000481019 PBXIP1Q96AQ6 731 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 MRFAP1L1Q96HT8 127 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 CEP295NLQ96MC4 621 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 RNF38Q9H0F5 515 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 NDST4Q9H3R1 872 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 OSER1Q9NX31 292 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 MYO16Q9Y6X6 1858 aa12.93□□□□□ -0.34
PTPRF-213ENST00000481019 ZNF318Q5VUA4 2279 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 FAM92AA1XBS5 289 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 O00370 1275 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 CYP26A1O43174 497 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 PI15O43692 258 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 PNMA6AP0CW24 399 aaPredicted RBP12.92□□□□□ -0.34
PTPRF-213ENST00000481019 CD19P15391 556 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 PSMC3P17980 439 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 CDC25BP30305 580 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 DEKP35659 375 aaKnown RBP12.92□□□□□ -0.34
PTPRF-213ENST00000481019 KLK7P49862 253 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 FANCCQ00597 558 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 CETN1Q12798 172 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 EXOC3L4Q17RC7 722 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 PKDCCQ504Y2 493 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 APTXQ7Z2E3 356 aaKnown RBP12.92□□□□□ -0.34
PTPRF-213ENST00000481019 BMP8AQ7Z5Y6 402 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 TTC39CQ8N584 583 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 TTC8Q8TAM2 541 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 NDRG1Q92597 394 aaKnown RBP12.92□□□□□ -0.34
PTPRF-213ENST00000481019 FBXO32Q969P5 355 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 TRMT61BQ9BVS5 477 aaKnown RBP12.92□□□□□ -0.34
PTPRF-213ENST00000481019 VPS16Q9H269 839 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 NMUR1Q9HB89 426 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 TRPM5Q9NZQ8 1165 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 WNT16Q9UBV4 365 aa12.92□□□□□ -0.34
PTPRF-213ENST00000481019 TSPAN16Q9UKR8 245 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms