RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 CAV1Q03135 178 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 C1orf220Q5T0J3 134 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 ISLR2Q6UXK2 745 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 TTC7BQ86TV6 843 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 CENPKQ9BS16 269 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 DCLK3Q9C098 648 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 ASCC2Q9H1I8 757 aaPredicted RBP10.6□□□□□ -0.71
COMMD4-203ENST00000480484 ZWILCHQ9H900 591 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 TAS2R1Q9NYW7 299 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 ZNF70Q9UC06 446 aaPredicted RBP10.6□□□□□ -0.71
COMMD4-203ENST00000480484 SMG5Q9UPR3 1016 aaKnown RBP10.6□□□□□ -0.71
COMMD4-203ENST00000480484 CNTNAP1P78357 1384 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 ZNFX1Q9P2E3 1918 aaKnown RBP10.6□□□□□ -0.71
COMMD4-203ENST00000480484 USP1O94782 785 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 MUTP22033 750 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 MAPK4P31152 587 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 CIITAP33076 1130 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 BFSP1Q12934 665 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 MLC1Q15049 377 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 BMT2Q1RMZ1 405 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 CEP128Q6ZU80 1094 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 LRRC6Q86X45 466 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 SLC25A41Q8N5S1 370 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 FAM20AQ96MK3 541 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 FNBP1Q96RU3 617 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 MAK16Q9BXY0 300 aaKnown RBP10.6□□□□□ -0.71
COMMD4-203ENST00000480484 AGPAT3Q9NRZ7 376 aa10.6□□□□□ -0.71
COMMD4-203ENST00000480484 LARSQ9P2J5 1176 aaKnown RBP10.6□□□□□ -0.71
COMMD4-203ENST00000480484 GOLGA8SH3BPF8 625 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 GOLGA8MH3BSY2 632 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 PFDN1O60925 122 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 RALAP11233 206 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 GCAP28676 217 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 STT3AP46977 705 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 DSG1Q02413 1049 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 CETN1Q12798 172 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 EFTUD2Q15029 972 aaKnown RBP eCLIP10.59□□□□□ -0.711e-7■■■■■ 52.3
COMMD4-203ENST00000480484 LIN52Q52LA3 116 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 C16orf87Q6PH81 154 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 OTOP1Q7RTM1 612 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 FAM178BQ8IXR5 827 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 DAW1Q8N136 415 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 ARHGAP18Q8N392 663 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 PSPC1Q8WXF1 523 aaKnown RBP10.59□□□□□ -0.71
COMMD4-203ENST00000480484 KREMEN1Q96MU8 473 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 ETNK2Q9NVF9 386 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 KANSL3Q9P2N6 904 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 ATXN10Q9UBB4 475 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 ZNF212Q9UDV6 495 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 PI4K2BG5E9Z4 385 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 H3BRJ5 948 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 PRPF4O43172 522 aaKnown RBP eCLIP10.59□□□□□ -0.712e-7■■■■■ 39.9
COMMD4-203ENST00000480484 HNRNPRO43390 633 aaKnown RBP10.59□□□□□ -0.71
COMMD4-203ENST00000480484 HNRNPCL1O60812 293 aaKnown RBP10.59□□□□□ -0.71
COMMD4-203ENST00000480484 NCAM1P13591 858 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 THNSL2Q86YJ6 484 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 PASD1Q8IV76 773 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 ZBED8Q8IZ13 594 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 NMD3Q96D46 503 aaKnown RBP10.59□□□□□ -0.71
COMMD4-203ENST00000480484 HIC2Q96JB3 615 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 CLPTM1LQ96KA5 538 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 HSD17B14Q9BPX1 270 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 DNAAF2Q9NVR5 837 aaKnown RBP10.59□□□□□ -0.71
COMMD4-203ENST00000480484 ANGPTL2Q9UKU9 493 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 NEU2Q9Y3R4 380 aa10.59□□□□□ -0.71
COMMD4-203ENST00000480484 CFAP99D6REC4 459 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 PSMD10O75832 226 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 USP46P62068 366 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 NOP14P78316 857 aaKnown RBP10.58□□□□□ -0.72
COMMD4-203ENST00000480484 MYBPC3Q14896 1274 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.58□□□□□ -0.72
COMMD4-203ENST00000480484 KAZNQ674X7 775 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 SESTD1Q86VW0 696 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 SLX1AQ9BQ83 275 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 TMEM120AQ9BXJ8 343 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 PARVGQ9HBI0 331 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 EURLQ9NYK6 297 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 TMX2Q9Y320 296 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 B2RBV5 119 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 C19orf81C9J6K1 198 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 MYCLP1P12525 358 aaPredicted RBP10.58□□□□□ -0.72
COMMD4-203ENST00000480484 NFKB2Q00653 900 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 EN1Q05925 392 aaPredicted RBP10.58□□□□□ -0.72
COMMD4-203ENST00000480484 RIBC1Q8N443 379 aaPredicted RBP10.58□□□□□ -0.72
COMMD4-203ENST00000480484 CPA5Q8WXQ8 436 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 SLCO2A1Q92959 643 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 PTCD3Q96EY7 689 aaKnown RBP10.58□□□□□ -0.72
COMMD4-203ENST00000480484 VMP1Q96GC9 406 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 ZNF700Q9H0M5 742 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 UNC45AQ9H3U1 944 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 NDE1Q9NXR1 346 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 SAE1Q9UBE0 346 aaPredicted RBP10.58□□□□□ -0.72
COMMD4-203ENST00000480484 NOD1Q9Y239 953 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 ENO1P06733 434 aaKnown RBP10.58□□□□□ -0.72
COMMD4-203ENST00000480484 ADRB2P07550 413 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 ANPEPP15144 967 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 MTMR1Q13613 665 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 MTMR2Q13614 643 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 DLGAP5Q15398 846 aa10.58□□□□□ -0.72
COMMD4-203ENST00000480484 OLFML2BQ68BL8 750 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms