RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 CREMQ03060 361 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 TAP1Q03518 808 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 ADIGQ0VDE8 80 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 PPP1R15BQ5SWA1 713 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 FAM102AQ5T9C2 384 aaPredicted RBP18.5■□□□□ 0.55
UPF3A-206ENST00000480362 DCUN1D2Q6PH85 259 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 GPRIN1Q7Z2K8 1008 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 ZDHHC17Q8IUH5 632 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 TTC9BQ8N6N2 239 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 POF1BQ8WVV4 589 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 BTBD6Q96KE9 485 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 PBX4Q9BYU1 374 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 TRIM7Q9C029 511 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 RXFP1Q9HBX9 757 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 RRAGDQ9NQL2 400 aaPredicted RBP18.5■□□□□ 0.55
UPF3A-206ENST00000480362 FNIP2Q9P278 1114 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 MSRAQ9UJ68 235 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 ANAPC7Q9UJX3 599 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 PCDHGC5Q9Y5F6 944 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 PTPRDP23468 1912 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 TMEM191CA6NGB0 347 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 TMEM110-MUSTN1A8MSY1 372 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 BUB1BO60566 1050 aaPredicted RBP18.49■□□□□ 0.55
UPF3A-206ENST00000480362 ABLIM3O94929 683 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 HAPLN1P10915 354 aaPredicted RBP18.49■□□□□ 0.55
UPF3A-206ENST00000480362 DNAJB1P25685 340 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 GPR15P49685 360 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 NDUFV1P49821 464 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 ERVK-21P61565 698 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 RPL7AP62424 266 aaKnown RBP18.49■□□□□ 0.55
UPF3A-206ENST00000480362 UBE3AQ05086 875 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 ADCY1Q08828 1119 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 DUSP4Q13115 394 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 RAB33AQ14088 237 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 MESDQ14696 234 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 DDR2Q16832 855 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 MGAT5BQ3V5L5 792 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 RAB41Q5JT25 222 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 OLFML1Q6UWY5 402 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 JOSD2Q8TAC2 188 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 ZNF461Q8TAF7 563 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 CLEC4CQ8WTT0 213 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 ZNF592Q92610 1267 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 C8orf48Q96LL4 319 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 MCEEQ96PE7 176 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 TCF25Q9BQ70 676 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 C11orf84Q9BUA3 381 aaPredicted RBP18.49■□□□□ 0.55
UPF3A-206ENST00000480362 NKX2-4Q9H2Z4 354 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 CRISPLD1Q9H336 500 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 PNPLA8Q9NP80 782 aa18.49■□□□□ 0.55
UPF3A-206ENST00000480362 METTL5Q9NRN9 209 aaKnown RBP18.49■□□□□ 0.55
UPF3A-206ENST00000480362 AFF4Q9UHB7 1163 aaKnown RBP18.49■□□□□ 0.55
UPF3A-206ENST00000480362 MYO1FO00160 1098 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 TRIM66O15016 1216 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 GRM6O15303 877 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 TEX28O15482 410 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 CASQ1P31415 396 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 RFC1P35251 1148 aaPredicted RBP18.48■□□□□ 0.55
UPF3A-206ENST00000480362 RAB30Q15771 203 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 DNTTIP2Q5QJE6 756 aaKnown RBP18.48■□□□□ 0.55
UPF3A-206ENST00000480362 SDHAF4Q5VUM1 108 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 TPGS2Q68CL5 300 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 SLFN11Q7Z7L1 901 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 DAAM2Q86T65 1068 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 SYCE1Q8N0S2 351 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 SIX6OS1Q8N1H7 587 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 LRRC57Q8N9N7 239 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 NDRG1Q92597 394 aaKnown RBP18.48■□□□□ 0.55
UPF3A-206ENST00000480362 PIWIL1Q96J94 861 aaKnown RBP18.48■□□□□ 0.55
UPF3A-206ENST00000480362 SEPT5Q99719 369 aaPredicted RBP18.48■□□□□ 0.55
UPF3A-206ENST00000480362 ULBP1Q9BZM6 244 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 GOLPH3Q9H4A6 298 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 ENTPD7Q9NQZ7 604 aa18.48■□□□□ 0.55
UPF3A-206ENST00000480362 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.47■□□□□ 0.55
UPF3A-206ENST00000480362 TNFRSF10BO14763 440 aa18.47■□□□□ 0.55
UPF3A-206ENST00000480362 SOAT2O75908 522 aa18.47■□□□□ 0.55
UPF3A-206ENST00000480362 FBXO21O94952 628 aa18.47■□□□□ 0.55
UPF3A-206ENST00000480362 CSPG5O95196 566 aa18.47■□□□□ 0.55
UPF3A-206ENST00000480362 SEC24AO95486 1093 aa18.47■□□□□ 0.55
UPF3A-206ENST00000480362 CNPP09543 421 aaKnown RBP18.47■□□□□ 0.55
UPF3A-206ENST00000480362 SCNN1AP37088 669 aa18.47■□□□□ 0.55
UPF3A-206ENST00000480362 RNASE9P60153 205 aaKnown RBP18.47■□□□□ 0.55
UPF3A-206ENST00000480362 MRPS5P82675 430 aaKnown RBP18.47■□□□□ 0.55
UPF3A-206ENST00000480362 GPM6BQ13491 265 aa18.47■□□□□ 0.55
UPF3A-206ENST00000480362 TAF5Q15542 800 aa18.47■□□□□ 0.55
UPF3A-206ENST00000480362 KHSRPQ92945 711 aaKnown RBP eCLIP18.47■□□□□ 0.559e-6■□□□□ 8.8
UPF3A-206ENST00000480362 KLHL5Q96PQ7 755 aa18.47■□□□□ 0.55
UPF3A-206ENST00000480362 CNGB3Q9NQW8 809 aa18.47■□□□□ 0.55
UPF3A-206ENST00000480362 TLR9Q9NR96 1032 aa18.47■□□□□ 0.55
UPF3A-206ENST00000480362 TMEM59LQ9UK28 342 aa18.47■□□□□ 0.55
UPF3A-206ENST00000480362 FANCGO15287 622 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 GRAP2O75791 330 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 FTCDO95954 541 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 ZBED1O96006 694 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 USP17L7P0C7H9 530 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 ATF2P15336 505 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 TUFMP49411 452 aaKnown RBP18.46■□□□□ 0.55
UPF3A-206ENST00000480362 DAOAP59103 153 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 RPL10AP62906 217 aaKnown RBP18.46■□□□□ 0.55
UPF3A-206ENST00000480362 OGDHQ02218 1023 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms