RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 IQCDQ96DY2 449 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 RPGRIP1Q96KN7 1286 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 MYADMQ96S97 322 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 XPO4Q9C0E2 1151 aaKnown RBP20.85■□□□□ 0.93
LIME1-205ENST00000480139 TTYH3Q9C0H2 523 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 RBSNQ9H1K0 784 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 FBXO44Q9H4M3 255 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 PCDHGC3Q9UN70 934 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 ANAPC1Q9H1A4 1944 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 NUP210Q8TEM1 1887 aaPredicted RBP20.84■□□□□ 0.93
LIME1-205ENST00000480139 MYO16Q9Y6X6 1858 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 A0A1W2PRU2 124 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 C2CD4DB7Z1M9 353 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 M0QYV0 167 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 TADA3O75528 432 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 CALCAP01258 141 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 LAMP2P13473 410 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 DDX6P26196 483 aaKnown RBP eCLIP20.84■□□□□ 0.934e-8■■□□□ 14.4
LIME1-205ENST00000480139 YWHAQP27348 245 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 GBP2P32456 591 aaPredicted RBP20.84■□□□□ 0.93
LIME1-205ENST00000480139 STAT1P42224 750 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 PDE4CQ08493 712 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 ARHGAP15Q53QZ3 475 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 RAB41Q5JT25 222 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 CACNA2D4Q7Z3S7 1137 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 PIGZQ86VD9 579 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 SLC47A2Q86VL8 602 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 GAS2L3Q86XJ1 694 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 FMNL3Q8IVF7 1028 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 PDZD8Q8NEN9 1154 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 ADAMTS19Q8TE59 1207 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 SLC35F5Q8WV83 523 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 KCTD13Q8WZ19 329 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 SLITRK1Q96PX8 696 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 NUP58Q9BVL2 599 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 ATXN3LQ9H3M9 355 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 ACP6Q9NPH0 428 aa20.84■□□□□ 0.93
LIME1-205ENST00000480139 ITIH6Q6UXX5 1313 aa20.83■□□□□ 0.93
LIME1-205ENST00000480139 NRG2O14511 850 aaPredicted RBP20.83■□□□□ 0.93
LIME1-205ENST00000480139 CYP11B1P15538 503 aa20.83■□□□□ 0.93
LIME1-205ENST00000480139 PDE6CP51160 858 aa20.83■□□□□ 0.93
LIME1-205ENST00000480139 KIF11P52732 1056 aa20.83■□□□□ 0.93
LIME1-205ENST00000480139 TEAD2Q15562 447 aa20.83■□□□□ 0.93
LIME1-205ENST00000480139 GPRIN1Q7Z2K8 1008 aa20.83■□□□□ 0.93
LIME1-205ENST00000480139 SCAMP5Q8TAC9 235 aa20.83■□□□□ 0.93
LIME1-205ENST00000480139 ING5Q8WYH8 240 aa20.83■□□□□ 0.93
LIME1-205ENST00000480139 USP3Q9Y6I4 520 aa20.83■□□□□ 0.93
LIME1-205ENST00000480139 PFKLP17858 780 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 WEE1P30291 646 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 GPD2P43304 727 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 TAF10Q12962 218 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 PTPN21Q16825 1174 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 SNX30Q5VWJ9 437 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 ZNF677Q86XU0 584 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 UBA3Q8TBC4 463 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 EPS8L1Q8TE68 723 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 STK32AQ8WU08 396 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 BAP1Q92560 729 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 MRPS31Q92665 395 aaKnown RBP20.82■□□□□ 0.92
LIME1-205ENST00000480139 SECISBP2LQ93073 1101 aaKnown RBP20.82■□□□□ 0.92
LIME1-205ENST00000480139 LHX5Q9H2C1 402 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 TRPM5Q9NZQ8 1165 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 SCML2Q9UQR0 700 aa20.82■□□□□ 0.92
LIME1-205ENST00000480139 A0A1W2PQJ5 194 aa20.81■□□□□ 0.92
LIME1-205ENST00000480139 TULP2O00295 520 aa20.81■□□□□ 0.92
LIME1-205ENST00000480139 GFPT2O94808 682 aa20.81■□□□□ 0.92
LIME1-205ENST00000480139 GJA1P17302 382 aa20.81■□□□□ 0.92
LIME1-205ENST00000480139 SP100P23497 879 aaPredicted RBP20.81■□□□□ 0.92
LIME1-205ENST00000480139 RPL34P49207 117 aaKnown RBP20.81■□□□□ 0.92
LIME1-205ENST00000480139 CCDC186Q7Z3E2 898 aa20.81■□□□□ 0.92
LIME1-205ENST00000480139 DDX1Q92499 740 aaKnown RBP20.81■□□□□ 0.92
LIME1-205ENST00000480139 FBXO32Q969P5 355 aa20.81■□□□□ 0.92
LIME1-205ENST00000480139 HSFY1Q96LI6 401 aa20.81■□□□□ 0.92
LIME1-205ENST00000480139 UHRF1Q96T88 793 aaPredicted RBP20.81■□□□□ 0.92
LIME1-205ENST00000480139 TASP1Q9H6P5 420 aa20.81■□□□□ 0.92
LIME1-205ENST00000480139 CYLDQ9NQC7 956 aa20.81■□□□□ 0.92
LIME1-205ENST00000480139 ZNF840PA6NDX5 716 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 ANHXE9PGG2 379 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 ZDHHC11BP0C7U3 371 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 CCDC172P0C7W6 258 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 KRT9P35527 623 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 CYP4F8P98187 520 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 GPR158Q5T848 1215 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 DENND1BQ6P3S1 775 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 POTEHQ6S545 545 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 MTSS1LQ765P7 747 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 MON1AQ86VX9 555 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 GJD3Q8N144 294 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 SCML4Q8N228 414 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 NXPE3Q969Y0 559 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 MCRS1Q96EZ8 462 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 TRPV4Q9HBA0 871 aa20.8■□□□□ 0.92
LIME1-205ENST00000480139 NOCTQ9UK39 431 aaKnown RBP20.8■□□□□ 0.92
LIME1-205ENST00000480139 CFHP08603 1231 aa20.79■□□□□ 0.92
LIME1-205ENST00000480139 FERP16591 822 aa20.79■□□□□ 0.92
LIME1-205ENST00000480139 TKTL1P51854 596 aa20.79■□□□□ 0.92
LIME1-205ENST00000480139 IFRD2Q12894 506 aaPredicted RBP20.79■□□□□ 0.92
LIME1-205ENST00000480139 STXBP5Q5T5C0 1151 aa20.79■□□□□ 0.92
LIME1-205ENST00000480139 PM20D1Q6GTS8 502 aa20.79■□□□□ 0.92
LIME1-205ENST00000480139 PMF1Q6P1K2 205 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms