RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 C20orf173Q96LM9 149 aa6.89□□□□□ -1.31
PBRM1-220ENST00000480064 MYOCQ99972 504 aa6.89□□□□□ -1.31
PBRM1-220ENST00000480064 MRI1Q9BV20 369 aa6.89□□□□□ -1.31
PBRM1-220ENST00000480064 KRTAP4-11Q9BYQ6 195 aa6.89□□□□□ -1.31
PBRM1-220ENST00000480064 ARHGAP39Q9C0H5 1083 aa6.89□□□□□ -1.31
PBRM1-220ENST00000480064 ZCWPW1Q9H0M4 648 aa6.89□□□□□ -1.31
PBRM1-220ENST00000480064 NELFAQ9H3P2 528 aa6.89□□□□□ -1.31
PBRM1-220ENST00000480064 ZCCHC4Q9H5U6 513 aa6.89□□□□□ -1.31
PBRM1-220ENST00000480064 MBD1Q9UIS9 605 aaPredicted RBP6.89□□□□□ -1.31
PBRM1-220ENST00000480064 CAPN11Q9UMQ6 739 aa6.89□□□□□ -1.31
PBRM1-220ENST00000480064 HPSEQ9Y251 543 aa6.89□□□□□ -1.31
PBRM1-220ENST00000480064 TMEM5Q9Y2B1 443 aa6.89□□□□□ -1.31
PBRM1-220ENST00000480064 FRMD4BQ9Y2L6 1034 aa6.89□□□□□ -1.31
PBRM1-220ENST00000480064 ADAMTS20P59510 1910 aa6.89□□□□□ -1.31
PBRM1-220ENST00000480064 PNMA6EA0A0J9YXQ4 647 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 PRSS29PA6NIE9 313 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 RGS10O43665 173 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 TOX4O94842 621 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 KLHL18O94889 574 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 SGPL1O95470 568 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 TFRCP02786 760 aaKnown RBP6.88□□□□□ -1.31
PBRM1-220ENST00000480064 CPA1P15085 419 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 ETV4P43268 484 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 SMAD4Q13485 552 aaKnown RBP6.88□□□□□ -1.31
PBRM1-220ENST00000480064 MAMLD1Q13495 774 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 SSPNQ14714 243 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 KCNAB1Q14722 419 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 BAK1Q16611 211 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 TBC1D10BQ4KMP7 808 aaPredicted RBP6.88□□□□□ -1.31
PBRM1-220ENST00000480064 CCDC92Q53HC0 331 aaPredicted RBP6.88□□□□□ -1.31
PBRM1-220ENST00000480064 KLHL24Q6TFL4 600 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 ATF7IPQ6VMQ6 1270 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 UBE3BQ7Z3V4 1068 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 TMEM151BQ8IW70 566 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 CHCHD4Q8N4Q1 142 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 NSUN4Q96CB9 384 aaKnown RBP6.88□□□□□ -1.31
PBRM1-220ENST00000480064 TXLNGYQ9BZA5 131 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 PLSCR4Q9NRQ2 329 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 DIAPH3Q9NSV4 1193 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 SIRT5Q9NXA8 310 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 NCDNQ9UBB6 729 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 ZHX1Q9UKY1 873 aaPredicted RBP6.88□□□□□ -1.31
PBRM1-220ENST00000480064 NFU1Q9UMS0 254 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 SHOC2Q9UQ13 582 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 DNAJC16Q9Y2G8 782 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 SNX8Q9Y5X2 465 aa6.88□□□□□ -1.31
PBRM1-220ENST00000480064 hCG_1807616A0A1W2PRN6 198 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 VWA3AA6NCI4 1184 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 STX16-NPEPL1H3BU86 382 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 STX16O14662 325 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 TSPAN4O14817 238 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 KIAA0355O15063 1070 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 KLK10O43240 276 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 RRP9O43818 475 aaKnown RBP6.87□□□□□ -1.31
PBRM1-220ENST00000480064 PTP4A3O75365 173 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 AMHP03971 560 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 JUNP05412 331 aaKnown RBP6.87□□□□□ -1.31
PBRM1-220ENST00000480064 GLULP15104 373 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 HOXD13P35453 343 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 MLH1P40692 756 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 BUD31P41223 144 aaPredicted RBP6.87□□□□□ -1.31
PBRM1-220ENST00000480064 ITGA1P56199 1179 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 RAP2BP61225 183 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 MPP3Q13368 585 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 SEC23BQ15437 767 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 FCRL6Q6DN72 434 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 TRMT10BQ6PF06 316 aaKnown RBP6.87□□□□□ -1.31
PBRM1-220ENST00000480064 GET4Q7L5D6 327 aaPredicted RBP6.87□□□□□ -1.31
PBRM1-220ENST00000480064 KRT74Q7RTS7 529 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 DIS3L2Q8IYB7 885 aaKnown RBP6.87□□□□□ -1.31
PBRM1-220ENST00000480064 ANKRD44Q8N8A2 993 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 HMGB4Q8WW32 186 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 STAMQ92783 540 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 CALML4Q96GE6 196 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 SIGLEC10Q96LC7 697 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 MED15Q96RN5 788 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 YME1L1Q96TA2 773 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 VPS16Q9H269 839 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 EPC1Q9H2F5 836 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 ZCCHC17Q9NP64 241 aaKnown RBP6.87□□□□□ -1.31
PBRM1-220ENST00000480064 KLHL14Q9P2G3 628 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 GIMAP2Q9UG22 337 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 RPS6KA6Q9UK32 745 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 HSF4Q9ULV5 492 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 CAMK2AQ9UQM7 478 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 IRAK3Q9Y616 596 aa6.87□□□□□ -1.31
PBRM1-220ENST00000480064 ZSCAN9O15535 394 aaPredicted RBP6.86□□□□□ -1.31
PBRM1-220ENST00000480064 GUCY1B2O75343 617 aa6.86□□□□□ -1.31
PBRM1-220ENST00000480064 SASH1O94885 1247 aa6.86□□□□□ -1.31
PBRM1-220ENST00000480064 KIF20AO95235 890 aa6.86□□□□□ -1.31
PBRM1-220ENST00000480064 PORP16435 677 aaPredicted RBP6.86□□□□□ -1.31
PBRM1-220ENST00000480064 OAS2P29728 719 aaKnown RBP6.86□□□□□ -1.31
PBRM1-220ENST00000480064 VIPR1P32241 457 aa6.86□□□□□ -1.31
PBRM1-220ENST00000480064 CASRP41180 1078 aa6.86□□□□□ -1.31
PBRM1-220ENST00000480064 UBA7P41226 1012 aa6.86□□□□□ -1.31
PBRM1-220ENST00000480064 MC1RQ01726 317 aa6.86□□□□□ -1.31
PBRM1-220ENST00000480064 CDC16Q13042 620 aa6.86□□□□□ -1.31
PBRM1-220ENST00000480064 ATP1A4Q13733 1029 aa6.86□□□□□ -1.31
PBRM1-220ENST00000480064 TBCEQ15813 527 aaPredicted RBP6.86□□□□□ -1.31
PBRM1-220ENST00000480064 FAM69AQ5T7M9 428 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms