RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 ATP6V1B1P15313 513 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 NAPAP54920 295 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 IRX4P78413 519 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 IKQ13123 557 aaPredicted RBP11.34□□□□□ -0.59
CHD6-208ENST00000480022 SYCP2LQ5T4T6 812 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 TMC7Q7Z402 723 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 ZNF410Q86VK4 478 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 CASP10Q92851 521 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 SSU72Q9NP77 194 aaKnown RBP11.34□□□□□ -0.59
CHD6-208ENST00000480022 ADAMTS6Q9UKP5 1117 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 FSCN2O14926 492 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 CLDN3O15551 220 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 ZBED1O96006 694 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 DLDP09622 509 aaKnown RBP11.34□□□□□ -0.59
CHD6-208ENST00000480022 PLS3P13797 630 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 CLCN2P51788 898 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 PFKPQ01813 784 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 TCEAL1Q15170 157 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 TRIP10Q15642 601 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 RNF111Q6ZNA4 994 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 ERI1Q8IV48 349 aaKnown RBP11.34□□□□□ -0.59
CHD6-208ENST00000480022 SCAIQ8N9R8 606 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 MAK16Q9BXY0 300 aaKnown RBP11.34□□□□□ -0.59
CHD6-208ENST00000480022 C6orf50Q9HD87 102 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 IGSF5Q9NSI5 407 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 HESX1Q9UBX0 185 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 DNAJC12Q9UKB3 198 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 TSC22D4Q9Y3Q8 395 aa11.34□□□□□ -0.59
CHD6-208ENST00000480022 PDHXO00330 501 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 DENRO43583 198 aaKnown RBP11.33□□□□□ -0.6
CHD6-208ENST00000480022 MYL2P10916 166 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 NAT2P11245 290 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 RRM1P23921 792 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 NFKBIAP25963 317 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 PMLP29590 882 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 GNA11P29992 359 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 TMED10P49755 219 aaKnown RBP11.33□□□□□ -0.6
CHD6-208ENST00000480022 VCPP55072 806 aaKnown RBP11.33□□□□□ -0.6
CHD6-208ENST00000480022 NCKAP1LP55160 1127 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 SREBF2Q12772 1141 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 FAM160B2Q86V87 743 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 ADGRF4Q8IZF3 695 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 ZNF276Q8N554 614 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 CHURC1Q8WUH1 139 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 SLC35C1Q96A29 364 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 COX4I2Q96KJ9 171 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 SRPK1Q96SB4 655 aaKnown RBP11.33□□□□□ -0.6
CHD6-208ENST00000480022 RBM15Q96T37 977 aaKnown RBP eCLIP11.33□□□□□ -0.69e-6■□□□□ 8.2
CHD6-208ENST00000480022 PLVAPQ9BX97 442 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 VPS11Q9H270 941 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 Q9H521 79 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 RETREG1Q9H6L5 497 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 CHST7Q9NS84 486 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 SELENONQ9NZV5 590 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 PRR12Q9ULL5 1215 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 SLC45A1Q9Y2W3 748 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 LOC285556D6RIA3 1793 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 SMCO2A6NFE2 343 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 CAPN14A8MX76 684 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 PEX1O43933 1283 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 AKAP3O75969 853 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 TNFAIP8O95379 198 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 KRT4P19013 534 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 CDH2P19022 906 aaPredicted RBP11.33□□□□□ -0.6
CHD6-208ENST00000480022 FDFT1P37268 417 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 TM4SF4P48230 202 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 GPC5P78333 572 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 CACNB1Q02641 598 aaPredicted RBP11.33□□□□□ -0.6
CHD6-208ENST00000480022 BTKQ06187 659 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 COG2Q14746 738 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 LLGL1Q15334 1064 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 TLR1Q15399 786 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 EFHC1Q5JVL4 640 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 IZUMO3Q5VZ72 239 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 IFNL1Q8IU54 200 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 GSTCDQ8NEC7 633 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 ITPKCQ96DU7 683 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 CCT7Q99832 543 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 TUT1Q9H6E5 874 aaKnown RBP11.33□□□□□ -0.6
CHD6-208ENST00000480022 RIOX1Q9H6W3 641 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 JMJD4Q9H9V9 463 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 VAT1LQ9HCJ6 419 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 TAGLN3Q9UI15 199 aa11.33□□□□□ -0.6
CHD6-208ENST00000480022 C2orf71A6NGG8 1288 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 TTLL13PA6NNM8 815 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 H3BSA7 217 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 FTLP02792 175 aaPredicted RBP11.32□□□□□ -0.6
CHD6-208ENST00000480022 DSG3P32926 999 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 NR1H2P55055 460 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 SNAP25P60880 206 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 KDSRQ06136 332 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 ECM1Q16610 540 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 GRAMD1BQ3KR37 738 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 PCNX4Q63HM2 1172 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 DHRS4L2Q6PKH6 230 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 ANO5Q75V66 913 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 ALYREFQ86V81 257 aaKnown RBP11.32□□□□□ -0.6
CHD6-208ENST00000480022 AHI1Q8N157 1196 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 SLC26A7Q8TE54 656 aa11.32□□□□□ -0.6
CHD6-208ENST00000480022 ATG4AQ8WYN0 398 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms