RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 SPACA7Q96KW9 195 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 TMEM175Q9BSA9 504 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 ZWILCHQ9H900 591 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 RSPH14Q9UHP6 348 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 NDRG2Q9UN36 371 aaKnown RBP6.23□□□□□ -1.41
CPS1-207ENST00000479988 PCDHB9Q9Y5E1 797 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 TAF1P21675 1872 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 TTC36A6NLP5 189 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 F8VZ95 297 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 CCL16O15467 120 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 CCNE2O96020 404 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 F9P00740 461 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 KRT1P04264 644 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 GEMIN4P57678 1058 aaKnown RBP6.23□□□□□ -1.41
CPS1-207ENST00000479988 TPI1P60174 286 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 GTF2BQ00403 316 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 TAP1Q03518 808 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 KRT71Q3SY84 523 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 CEP85LQ5SZL2 805 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 SMYD5Q6GMV2 418 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 LRIG3Q6UXM1 1119 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 PNKPQ96T60 521 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 TLR10Q9BXR5 811 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 NXF3Q9H4D5 531 aaKnown RBP6.23□□□□□ -1.41
CPS1-207ENST00000479988 MAFBQ9Y5Q3 323 aaPredicted RBP6.23□□□□□ -1.41
CPS1-207ENST00000479988 NDUFAB1O14561 156 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 FGGP02679 453 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 SETSIPP0DME0 302 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 VDRP11473 427 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 HOXB8P17481 243 aaPredicted RBP6.23□□□□□ -1.41
CPS1-207ENST00000479988 FSHRP23945 695 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 TNFRSF8P28908 595 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 CAV1Q03135 178 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 UBE3AQ05086 875 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 DCAF6Q58WW2 860 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 ZNF571Q7Z3V5 609 aaPredicted RBP6.23□□□□□ -1.41
CPS1-207ENST00000479988 CBWD2Q8IUF1 395 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 CREG2Q8IUH2 290 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 BCO2Q9BYV7 579 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 R3HDMLQ9H3Y0 253 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 PLEKHA4Q9H4M7 779 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 SUDS3Q9H7L9 328 aaPredicted RBP6.23□□□□□ -1.41
CPS1-207ENST00000479988 CATSPERBQ9H7T0 1116 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 ALG13Q9NP73 1137 aaKnown RBP6.23□□□□□ -1.41
CPS1-207ENST00000479988 TBC1D14Q9P2M4 693 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 ASIC3Q9UHC3 531 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 GTF3C4Q9UKN8 822 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 C2CD2Q9Y426 696 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 DUSP10Q9Y6W6 482 aa6.23□□□□□ -1.41
CPS1-207ENST00000479988 ASTN1O14525 1302 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 FAM155AB1AL88 458 aaPredicted RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 ZNF185O15231 689 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 PMM2O15305 246 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 ZNF189O75820 626 aaPredicted RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 LUC7L3O95232 432 aaKnown RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 ARIH2O95376 493 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 ACAT1P24752 427 aaKnown RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 ATP5C1P36542 298 aaKnown RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 PSEN1P49768 467 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 GUCY2FP51841 1108 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 RABGGTBP53611 331 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 DR1Q01658 176 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 KAZNQ674X7 775 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 JADE1Q6IE81 842 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 DNAAF3Q8N9W5 541 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 C12orf50Q8NA57 414 aaPredicted RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 SLC35G2Q8TBE7 412 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 CRYGNQ8WXF5 182 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 CAVIN3Q969G5 261 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 MCRS1Q96EZ8 462 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 FMO2Q99518 471 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 CDCA3Q99618 268 aaPredicted RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 ISCUQ9H1K1 167 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 CNOT10Q9H9A5 744 aaKnown RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 ADGRA3Q8IWK6 1321 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 A0A0U1RQF3 1178 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 MEI4A8MW99 385 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 I3L4J1 428 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 TGFB1I1O43294 461 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 APODP05090 189 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 ATP11AP98196 1134 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 RETSATQ6NUM9 610 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 SYDE1Q6ZW31 735 aaPredicted RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 ANO5Q75V66 913 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 ANKS4BQ8N8V4 417 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 HERVK_113Q902F9 699 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 CCT6BQ92526 530 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 CBWD1Q9BRT8 395 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 DHX35Q9H5Z1 703 aaKnown RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 PPANQ9NQ55 473 aaKnown RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.22□□□□□ -1.41
CPS1-207ENST00000479988 DDIT4Q9NX09 232 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 CNOT8Q9UFF9 292 aaKnown RBP6.22□□□□□ -1.41
CPS1-207ENST00000479988 GMEB2Q9UKD1 530 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 GJD2Q9UKL4 321 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 CDH9Q9ULB4 789 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 NFU1Q9UMS0 254 aa6.22□□□□□ -1.41
CPS1-207ENST00000479988 ASS1P00966 412 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms