RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 ARHGAP17Q68EM7 881 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 VSTM1Q6UX27 236 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 TPRG1Q6ZUI0 275 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 KIAA2013Q8IYS2 634 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 SHKBP1Q8TBC3 707 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 MYCBPAPQ8TBZ2 947 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 WHAMMQ8TF30 809 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 SYN2Q92777 582 aaPredicted RBP9.46□□□□□ -0.9
DDX56-211ENST00000479602 IRF7Q92985 503 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 ZNF512Q96ME7 567 aaPredicted RBP9.46□□□□□ -0.9
DDX56-211ENST00000479602 CORO1BQ9BR76 489 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 TRMT61BQ9BVS5 477 aaKnown RBP9.46□□□□□ -0.9
DDX56-211ENST00000479602 NT5C1AQ9BXI3 368 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 UBXN6Q9BZV1 441 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 GPR88Q9GZN0 384 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 SPATA6Q9NWH7 488 aaPredicted RBP9.46□□□□□ -0.9
DDX56-211ENST00000479602 ZMYM5Q9UJ78 669 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 CHD6Q8TD26 2715 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 MED19A0JLT2 244 aaPredicted RBP9.45□□□□□ -0.9
DDX56-211ENST00000479602 PRRG1O14668 218 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 NCAM2O15394 837 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 NOL4O94818 638 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 PAPSS2O95340 614 aaPredicted RBP9.45□□□□□ -0.9
DDX56-211ENST00000479602 ANXA13P27216 316 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 HOXA6P31267 233 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 HNRNPH3P31942 346 aaKnown RBP9.45□□□□□ -0.9
DDX56-211ENST00000479602 BPIFB4P59827 614 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 TWF1Q12792 350 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 PLD1Q13393 1074 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 PUM1Q14671 1186 aaKnown RBP eCLIP9.45□□□□□ -0.9
DDX56-211ENST00000479602 UBXN2BQ14CS0 331 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 C4orf50Q6ZRC1 276 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 GAREM2Q75VX8 874 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 PDZD4Q76G19 769 aaPredicted RBP9.45□□□□□ -0.9
DDX56-211ENST00000479602 ZNF677Q86XU0 584 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 FAM71AQ8IYT1 594 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 SCML4Q8N228 414 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 B3GALNT2Q8NCR0 500 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 OR10T2Q8NGX3 314 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 DEPDC1BQ8WUY9 529 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 KREMEN1Q96MU8 473 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 HNRNPABQ99729 332 aaKnown RBP9.45□□□□□ -0.9
DDX56-211ENST00000479602 IER2Q9BTL4 223 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 STK33Q9BYT3 514 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 ELOVL4Q9GZR5 314 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 SMYD3Q9H7B4 428 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 CSNK1G1Q9HCP0 422 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 CYLDQ9NQC7 956 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 CISHQ9NSE2 258 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 COMMD8Q9NX08 183 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 DDX43Q9NXZ2 648 aaKnown RBP9.45□□□□□ -0.9
DDX56-211ENST00000479602 TAB2Q9NYJ8 693 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 MRPS17Q9Y2R5 130 aaKnown RBP9.45□□□□□ -0.9
DDX56-211ENST00000479602 ASB3Q9Y575 518 aa9.45□□□□□ -0.9
DDX56-211ENST00000479602 TIMM13Q9Y5L4 95 aaPredicted RBP9.45□□□□□ -0.9
DDX56-211ENST00000479602 FAM92AA1XBS5 289 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 MYBPHLA2RUH7 354 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 F8VZ95 297 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 CHADO15335 359 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 GJA1P17302 382 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 SLC9A1P19634 815 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 CDC25BP30305 580 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 GNL1P36915 607 aaPredicted RBP9.44□□□□□ -0.9
DDX56-211ENST00000479602 PRKCIP41743 596 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 RPL34P49207 117 aaKnown RBP9.44□□□□□ -0.9
DDX56-211ENST00000479602 TUFMP49411 452 aaKnown RBP9.44□□□□□ -0.9
DDX56-211ENST00000479602 ARPP19P56211 112 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 UBASH3AP57075 661 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 UBXN1Q04323 297 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 DUSP4Q13115 394 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 GRM2Q14416 872 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 SYCP1Q15431 976 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 TEAD2Q15562 447 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 SCARA3Q6AZY7 606 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 IQCEQ6IPM2 695 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 TSSK4Q6SA08 328 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 DNAJB7Q7Z6W7 309 aaPredicted RBP9.44□□□□□ -0.9
DDX56-211ENST00000479602 OSTM1Q86WC4 334 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 GAS2L3Q86XJ1 694 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 DRC7Q8IY82 874 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 PPM1KQ8N3J5 372 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 GPR161Q8N6U8 529 aaKnown RBP9.44□□□□□ -0.9
DDX56-211ENST00000479602 ZSCAN18Q8TBC5 510 aaPredicted RBP9.44□□□□□ -0.9
DDX56-211ENST00000479602 STK32AQ8WU08 396 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 PSMG2Q969U7 264 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 E2F7Q96AV8 911 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 SPATA17Q96L03 361 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 MYRFLQ96LU7 910 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 SYT15Q9BQS2 421 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 MRPL45Q9BRJ2 306 aaKnown RBP9.44□□□□□ -0.9
DDX56-211ENST00000479602 SDCBP2Q9H190 292 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 VPS16Q9H269 839 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 LMAN1LQ9HAT1 526 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 IL21Q9HBE4 155 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 OBP2AQ9NY56 170 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 PCDHGC3Q9UN70 934 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 YIPF1Q9Y548 306 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 NME7Q9Y5B8 376 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 ATP8B3O60423 1300 aa9.44□□□□□ -0.9
DDX56-211ENST00000479602 GREB1Q4ZG55 1949 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms