RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 ACO1P21399 889 aaKnown RBP7.11□□□□□ -1.27
USP48-208ENST00000479177 IBSPP21815 317 aaPredicted RBP7.11□□□□□ -1.27
USP48-208ENST00000479177 TBXAS1P24557 533 aaPredicted RBP7.11□□□□□ -1.27
USP48-208ENST00000479177 SSTR4P31391 388 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 ATICP31939 592 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 SOX5P35711 763 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 PRKCIP41743 596 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 STAT1P42224 750 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 KCNJ6P48051 423 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 MFAP3P55082 362 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 RBP5P82980 135 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 GRIK3Q13003 919 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 ARHGAP44Q17R89 818 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 SGSM1Q2NKQ1 1148 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 CLLU1OSQ5K130 101 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 C9orf57Q5W0N0 161 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 MFSD5Q6N075 450 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 GLB1LQ6UWU2 654 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 CYP26C1Q6V0L0 522 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 RAD9BQ6WBX8 426 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 SCARA5Q6ZMJ2 495 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 ENOSF1Q7L5Y1 443 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.11□□□□□ -1.27
USP48-208ENST00000479177 LRRC52Q8N7C0 313 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 KLHL23Q8NBE8 558 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 OLIG1Q8TAK6 271 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 FAXDC2Q96IV6 333 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 ZNF560Q96MR9 790 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 BCO2Q9BYV7 579 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 ELAC1Q9H777 363 aaKnown RBP7.11□□□□□ -1.27
USP48-208ENST00000479177 SMYD3Q9H7B4 428 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 AKTIPQ9H8T0 292 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 PCMTD2Q9NV79 361 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 ZNHIT6Q9NWK9 470 aaKnown RBP7.11□□□□□ -1.27
USP48-208ENST00000479177 ARHGAP20Q9P2F6 1191 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 PYCARDQ9ULZ3 195 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 AGAP1Q9UPQ3 857 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 INPP5FQ9Y2H2 1132 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 ZKSCAN5Q9Y2L8 839 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 PTPRSQ13332 1948 aa7.11□□□□□ -1.27
USP48-208ENST00000479177 PDE4DIPQ5VU43 2346 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 SSU72P8A0A1W2PR75 194 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 FOXN3O00409 490 aaPredicted RBP7.1□□□□□ -1.27
USP48-208ENST00000479177 PODXLO00592 558 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 PIRO00625 290 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 B4GALT3O60512 393 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 GFPT2O94808 682 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 CLSTN1O94985 981 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 POMCP01189 267 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 SERPING1P05155 500 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 THP07101 528 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 PFKMP08237 780 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 PLEKP08567 350 aaPredicted RBP7.1□□□□□ -1.27
USP48-208ENST00000479177 FGFR1P11362 822 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 CSF2RAP15509 400 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 FERP16591 822 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 ANXA13P27216 316 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 PNPLA4P41247 253 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 ZNF132P52740 706 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 PCDH1Q08174 1060 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 C19orf57Q0VDD7 668 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 MYO1EQ12965 1108 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 TUSC3Q13454 348 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 MTF1Q14872 753 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.1□□□□□ -1.27
USP48-208ENST00000479177 TDRD12Q587J7 1177 aaKnown RBP7.1□□□□□ -1.27
USP48-208ENST00000479177 ZNF667Q5HYK9 610 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 NOMO2Q5JPE7 1267 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 IRF2BP2Q7Z5L9 587 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 NPAS4Q8IUM7 802 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 TMTC1Q8IUR5 882 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 FMNL3Q8IVF7 1028 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 FAM71AQ8IYT1 594 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 C7orf61Q8IZ16 206 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 TMEM199Q8N511 208 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 URGCPQ8TCY9 931 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 JAKMIP2Q96AA8 810 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 ABHD8Q96I13 439 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 HPDLQ96IR7 371 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 CHP1Q99653 195 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 SYT11Q9BT88 431 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 SDCBP2Q9H190 292 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 MIOSQ9NXC5 875 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 CACNG4Q9UBN1 327 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 CNTN6Q9UQ52 1028 aa7.1□□□□□ -1.27
USP48-208ENST00000479177 ABHD14A-ACY1A0A1B0GW23 586 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 CASTOR2A6NHX0 329 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 EFCAB14O75071 495 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 DLGAP3O95886 979 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 P4HA1P13674 534 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 RPL9P32969 192 aaKnown RBP7.09□□□□□ -1.27
USP48-208ENST00000479177 EIF4A3P38919 411 aaKnown RBP7.09□□□□□ -1.27
USP48-208ENST00000479177 RAP1GAPP47736 663 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 AARSP49588 968 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP48-208ENST00000479177 TAF6P49848 677 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 GATMP50440 423 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 KIF11P52732 1056 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 YWHAEP62258 255 aaKnown RBP7.09□□□□□ -1.27
USP48-208ENST00000479177 TNNC1P63316 161 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 ARID5AQ03989 594 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms