RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PPP1R21Q6ZMI0 780 aa11.31□□□□□ -0.6
VPS52-217ENST00000478934 FAM183BPQ6ZVS7 135 aa11.31□□□□□ -0.6
VPS52-217ENST00000478934 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
VPS52-217ENST00000478934 PPIL6Q8IXY8 311 aa11.31□□□□□ -0.6
VPS52-217ENST00000478934 PAFAH2Q99487 392 aa11.31□□□□□ -0.6
VPS52-217ENST00000478934 SGIP1Q9BQI5 828 aa11.31□□□□□ -0.6
VPS52-217ENST00000478934 SMARCAD1Q9H4L7 1026 aa11.31□□□□□ -0.6
VPS52-217ENST00000478934 NPHS2Q9NP85 383 aa11.31□□□□□ -0.6
VPS52-217ENST00000478934 STRIP2Q9ULQ0 834 aa11.31□□□□□ -0.6
VPS52-217ENST00000478934 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
VPS52-217ENST00000478934 SHOC2Q9UQ13 582 aa11.31□□□□□ -0.6
VPS52-217ENST00000478934 HES2Q9Y543 173 aa11.31□□□□□ -0.6
VPS52-217ENST00000478934 NME7Q9Y5B8 376 aa11.31□□□□□ -0.6
VPS52-217ENST00000478934 BRCA2P51587 3418 aa11.31□□□□□ -0.6
VPS52-217ENST00000478934 DNAJC25-GNG10A0A024R161 153 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.3□□□□□ -0.6
VPS52-217ENST00000478934 CFAP73A6NFT4 308 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 C2orf71A6NGG8 1288 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 F5H423 210 aaPredicted RBP11.3□□□□□ -0.6
VPS52-217ENST00000478934 PFKMP08237 780 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 KRT7P08729 469 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 ELK3P41970 407 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 TAP1Q03518 808 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 MKRN3Q13064 507 aaKnown RBP11.3□□□□□ -0.6
VPS52-217ENST00000478934 MOGSQ13724 837 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 DPYSL3Q14195 570 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 SURF1Q15526 300 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 HADHQ16836 314 aaKnown RBP11.3□□□□□ -0.6
VPS52-217ENST00000478934 ASRGL1Q7L266 308 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 POLNQ7Z5Q5 900 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 SCUBE3Q8IX30 993 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 CCHCR1Q8TD31 782 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 DCPSQ96C86 337 aaKnown RBP11.3□□□□□ -0.6
VPS52-217ENST00000478934 ARHGEF3Q9NR81 526 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 GEMIN8Q9NWZ8 242 aaKnown RBP11.3□□□□□ -0.6
VPS52-217ENST00000478934 TSPAN16Q9UKR8 245 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 HEY1Q9Y5J3 304 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 GABBR2O75899 941 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 PDGFRAP16234 1089 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 CLNS1AP54105 237 aaKnown RBP11.3□□□□□ -0.6
VPS52-217ENST00000478934 NAA25Q14CX7 972 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 PLEKHG4Q58EX7 1191 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 PMF1Q6P1K2 205 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 DARS2Q6PI48 645 aaKnown RBP11.3□□□□□ -0.6
VPS52-217ENST00000478934 PRPF39Q86UA1 669 aaKnown RBP11.3□□□□□ -0.6
VPS52-217ENST00000478934 PALM2Q8IXS6 379 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 CMASQ8NFW8 434 aaPredicted RBP11.3□□□□□ -0.6
VPS52-217ENST00000478934 AFG1LQ8WV93 481 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 PTPRN2Q92932 1015 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 MCRS1Q96EZ8 462 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 TTC25Q96NG3 672 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 NKX1-2Q9UD57 310 aaPredicted RBP11.3□□□□□ -0.6
VPS52-217ENST00000478934 PPP2R3BQ9Y5P8 575 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 PTPRFP10586 1907 aa11.3□□□□□ -0.6
VPS52-217ENST00000478934 H0Y3Z8 333 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 MED7O43513 233 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 HBP1O60381 514 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 UPP2O95045 317 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 LGALS2P05162 132 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 ADCYAP1R1P41586 468 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 ARL4CP56559 192 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 GEMIN4P57678 1058 aaKnown RBP11.29□□□□□ -0.6
VPS52-217ENST00000478934 ARHGAP1Q07960 439 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 SPARCL1Q14515 664 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 TAZQ16635 292 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 EFHC2Q5JST6 749 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 GLRA4Q5JXX5 417 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 HHATQ5VTY9 493 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 PPP1R2P3Q6NXS1 205 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 ARMCX2Q7L311 632 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 ACOT1Q86TX2 421 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 TCP10LQ8TDR4 215 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 LRRC8CQ8TDW0 803 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 MRPL45Q9BRJ2 306 aaKnown RBP11.29□□□□□ -0.6
VPS52-217ENST00000478934 MIS12Q9H081 205 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 NGRNQ9NPE2 291 aaKnown RBP11.29□□□□□ -0.6
VPS52-217ENST00000478934 PSMC3IPQ9P2W1 217 aaPredicted RBP11.29□□□□□ -0.6
VPS52-217ENST00000478934 ZMYND8Q9ULU4 1186 aaPredicted RBP11.29□□□□□ -0.6
VPS52-217ENST00000478934 ACTL7BQ9Y614 415 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 RNF8O76064 485 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 UNC5CO95185 931 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 HMGCRP04035 888 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 IL4RP24394 825 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 SMAD1Q15797 465 aaKnown RBP11.29□□□□□ -0.6
VPS52-217ENST00000478934 PPP1R26Q5T8A7 1209 aaPredicted RBP11.29□□□□□ -0.6
VPS52-217ENST00000478934 OTOAQ7RTW8 1153 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 TDRPQ86YL5 185 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 CLEC4CQ8WTT0 213 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 DCAKDQ8WVC6 231 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 ZNF75CPQ92670 426 aaPredicted RBP11.29□□□□□ -0.6
VPS52-217ENST00000478934 OPTNQ96CV9 577 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 L3MBTL3Q96JM7 780 aaPredicted RBP11.29□□□□□ -0.6
VPS52-217ENST00000478934 SERAC1Q96JX3 654 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 LRRC37BQ96QE4 947 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 FOXP3Q9BZS1 431 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 GJD2Q9UKL4 321 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 ANK1P16157 1881 aa11.29□□□□□ -0.6
VPS52-217ENST00000478934 LOC285556D6RIA3 1793 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 KBTBD13C9JR72 458 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms