RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 IFT74Q96LB3 600 aa6.92□□□□□ -1.3
HOXB3-209ENST00000478644 G6PC3Q9BUM1 346 aa6.92□□□□□ -1.3
HOXB3-209ENST00000478644 HERC2P3Q9BVR0 1158 aa6.92□□□□□ -1.3
HOXB3-209ENST00000478644 TIPINQ9BVW5 301 aa6.92□□□□□ -1.3
HOXB3-209ENST00000478644 C17orf75Q9HAS0 396 aa6.92□□□□□ -1.3
HOXB3-209ENST00000478644 RXFP1Q9HBX9 757 aa6.92□□□□□ -1.3
HOXB3-209ENST00000478644 ZDHHC7Q9NXF8 308 aa6.92□□□□□ -1.3
HOXB3-209ENST00000478644 DDX56Q9NY93 547 aaKnown RBP6.92□□□□□ -1.3
HOXB3-209ENST00000478644 EBF1Q9UH73 591 aa6.92□□□□□ -1.3
HOXB3-209ENST00000478644 SMC3Q9UQE7 1217 aa6.92□□□□□ -1.3
HOXB3-209ENST00000478644 FAM86C2PA6NEL3 165 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 ARL5CA6NH57 179 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 INO80B-WBP1J3KQ70 363 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 NRP1O14786 923 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 TNFRSF10CO14798 259 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 N4BP3O15049 544 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 SLC26A4O43511 780 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 GLUD1P00367 558 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 MED14OSP0DP75 135 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 PAX3P23760 479 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 GLUD2P49448 558 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 CLCN4P51793 760 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 NPEPPSP55786 919 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 DSG1Q02413 1049 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 NHLH1Q02575 133 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 GRIK3Q13003 919 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 DUSP4Q13115 394 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 PTPN14Q15678 1187 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 MAPK6Q16659 721 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 SEZ6Q53EL9 994 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 LARP1BQ659C4 914 aaKnown RBP6.91□□□□□ -1.3
HOXB3-209ENST00000478644 NLRC3Q7RTR2 1065 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 GPR149Q86SP6 731 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 ZNF655Q8N720 491 aaPredicted RBP6.91□□□□□ -1.3
HOXB3-209ENST00000478644 C4orf32Q8N8J7 132 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 ANKS4BQ8N8V4 417 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 SLC22A17Q8WUG5 538 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 NKD1Q969G9 470 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 TMEM143Q96AN5 459 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 EAF1Q96JC9 268 aaPredicted RBP6.91□□□□□ -1.3
HOXB3-209ENST00000478644 UROC1Q96N76 676 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 KLHL5Q96PQ7 755 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 RPS6KC1Q96S38 1066 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 RTP3Q9BQQ7 232 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 SEMA4AQ9H3S1 761 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 MAFFQ9ULX9 164 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 IPPQ9Y573 584 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 KIAA1671Q9BY89 1806 aa6.91□□□□□ -1.3
HOXB3-209ENST00000478644 PLXNA4Q9HCM2 1894 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 WDR81Q562E7 1941 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 H0YCG3 227 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 H3BQV1 296 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 TSPAN1O60635 241 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 TADA2AO75478 443 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 THP07101 528 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 POU2F2P09086 479 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 HNRNPA1P09651 372 aaKnown RBP eCLIP6.9□□□□□ -1.3
HOXB3-209ENST00000478644 NME1P15531 152 aaKnown RBP6.9□□□□□ -1.3
HOXB3-209ENST00000478644 ATF4P18848 351 aaPredicted RBP6.9□□□□□ -1.3
HOXB3-209ENST00000478644 PDCP20941 246 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 FGFR4P22455 802 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 NAMPTP43490 491 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 SLC11A1P49279 550 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 RARRES1P49788 294 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 TOB1P50616 345 aaPredicted RBP6.9□□□□□ -1.3
HOXB3-209ENST00000478644 MBTD1Q05BQ5 628 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 DSC1Q08554 894 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 DRP2Q13474 957 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 TDGQ13569 410 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 CTTNQ14247 550 aaKnown RBP6.9□□□□□ -1.3
HOXB3-209ENST00000478644 ZNF174Q15697 407 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 CLEC16AQ2KHT3 1053 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 DCAF4L1Q3SXM0 396 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 RILPL1Q5EBL4 403 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 TTC38Q5R3I4 469 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 PLA2G4FQ68DD2 849 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 CDCA2Q69YH5 1023 aaPredicted RBP6.9□□□□□ -1.3
HOXB3-209ENST00000478644 SPOCD1Q6ZMY3 1216 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 IRF2BP1Q8IU81 584 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 COLGALT2Q8IYK4 626 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 KREMEN2Q8NCW0 462 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 TSPAN18Q96SJ8 248 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 RNF32Q9H0A6 362 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 TMEM60Q9H2L4 133 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 EPB41L4BQ9H329 900 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 MFSD1Q9H3U5 465 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 FZD8Q9H461 694 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 TOPORSQ9NS56 1045 aaPredicted RBP6.9□□□□□ -1.3
HOXB3-209ENST00000478644 CHST7Q9NS84 486 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 RGL1Q9NZL6 768 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 KCND2Q9NZV8 630 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 WNT16Q9UBV4 365 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 ADAM28Q9UKQ2 775 aa6.9□□□□□ -1.3
HOXB3-209ENST00000478644 SF3B1O75533 1304 aaKnown RBP eCLIP6.9□□□□□ -1.3
HOXB3-209ENST00000478644 BRWD1Q9NSI6 2320 aa6.89□□□□□ -1.31
HOXB3-209ENST00000478644 ARHGEF35A5YM69 484 aa6.89□□□□□ -1.31
HOXB3-209ENST00000478644 NT5C1B-RDH14C9J2C7 533 aa6.89□□□□□ -1.31
HOXB3-209ENST00000478644 PROB1E7EW31 1015 aa6.89□□□□□ -1.31
HOXB3-209ENST00000478644 ACKR2O00590 384 aa6.89□□□□□ -1.31
HOXB3-209ENST00000478644 CSDE1O75534 798 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms