RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 TRPM5Q9NZQ8 1165 aa13.65□□□□□ -0.22
TDP2-204ENST00000478507 EVLQ9UI08 416 aaPredicted RBP13.65□□□□□ -0.22
TDP2-204ENST00000478507 BAHCC1Q9P281 2608 aa13.64□□□□□ -0.23
TDP2-204ENST00000478507 SGK1O00141 431 aa13.64□□□□□ -0.23
TDP2-204ENST00000478507 PRPF6O94906 941 aaKnown RBP13.64□□□□□ -0.23
TDP2-204ENST00000478507 TOP3BO95985 862 aaKnown RBP13.64□□□□□ -0.23
TDP2-204ENST00000478507 IDEP14735 1019 aa13.64□□□□□ -0.23
TDP2-204ENST00000478507 SLC6A11P48066 632 aa13.64□□□□□ -0.23
TDP2-204ENST00000478507 PPP3CCP48454 512 aa13.64□□□□□ -0.23
TDP2-204ENST00000478507 HSF5Q4G112 596 aaPredicted RBP13.64□□□□□ -0.23
TDP2-204ENST00000478507 RHBDF2Q6PJF5 856 aa13.64□□□□□ -0.23
TDP2-204ENST00000478507 ALLCQ8N6M5 410 aa13.64□□□□□ -0.23
TDP2-204ENST00000478507 GATA6Q92908 595 aa13.64□□□□□ -0.23
TDP2-204ENST00000478507 ANKRD36BP1Q96IX9 119 aa13.64□□□□□ -0.23
TDP2-204ENST00000478507 PANK4Q9NVE7 773 aa13.64□□□□□ -0.23
TDP2-204ENST00000478507 ZMIZ1Q9ULJ6 1067 aa13.64□□□□□ -0.23
TDP2-204ENST00000478507 CPQQ9Y646 472 aa13.64□□□□□ -0.23
TDP2-204ENST00000478507 F8VP50 259 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 TNFRSF10BO14763 440 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 TRIM66O15016 1216 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 ADAM23O75077 832 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 TACC1O75410 805 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 PDGFRBP09619 1106 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 SPINK2P20155 84 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 GRIK1P39086 918 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 CYP27A1Q02318 531 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 FOXC1Q12948 553 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 RESTQ13127 1097 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 CUL4AQ13619 759 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 DUOXA2Q1HG44 320 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 PEAR1Q5VY43 1037 aaPredicted RBP13.63□□□□□ -0.23
TDP2-204ENST00000478507 FAM173BQ6P4H8 233 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 CCDC73Q6ZRK6 1079 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 WDR49Q8IV35 697 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 FRMD1Q8N878 549 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 RLN3Q8WXF3 142 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 ZFRQ96KR1 1074 aaKnown RBP13.63□□□□□ -0.23
TDP2-204ENST00000478507 MRPL45Q9BRJ2 306 aaKnown RBP13.63□□□□□ -0.23
TDP2-204ENST00000478507 ADAM33Q9BZ11 813 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 TMEM74BQ9NUR3 256 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 SMPD4Q9NXE4 827 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 EHD2Q9NZN4 543 aa13.63□□□□□ -0.23
TDP2-204ENST00000478507 MBD1Q9UIS9 605 aaPredicted RBP13.63□□□□□ -0.23
TDP2-204ENST00000478507 CEP192Q8TEP8 1941 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 PCDH15Q96QU1 1955 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 ZNF233A6NK53 670 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 SLC9A3R1O14745 358 aaPredicted RBP13.62□□□□□ -0.23
TDP2-204ENST00000478507 SCAMP3O14828 347 aaKnown RBP13.62□□□□□ -0.23
TDP2-204ENST00000478507 KAT7O95251 611 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 KLF8O95600 359 aaPredicted RBP13.62□□□□□ -0.23
TDP2-204ENST00000478507 CST3P01034 146 aaPredicted RBP13.62□□□□□ -0.23
TDP2-204ENST00000478507 TNNC2P02585 160 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 FAM163BP0C2L3 166 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 ANXA13P27216 316 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 TXLNAP40222 546 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 PTGER3P43115 390 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 DHPSP49366 369 aaPredicted RBP13.62□□□□□ -0.23
TDP2-204ENST00000478507 TAF10Q12962 218 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 SURF1Q15526 300 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 MAP7D1Q3KQU3 841 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 MDH1BQ5I0G3 518 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 EMC10Q5UCC4 262 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 TRAPPC11Q7Z392 1133 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 ETFBKMTQ8IXQ9 262 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 TXNDC5Q8NBS9 432 aaKnown RBP13.62□□□□□ -0.23
TDP2-204ENST00000478507 WHAMMQ8TF30 809 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 PIGKQ92643 395 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 PNKPQ96T60 521 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 DUSP9Q99956 384 aaKnown RBP13.62□□□□□ -0.23
TDP2-204ENST00000478507 GZF1Q9H116 711 aaPredicted RBP13.62□□□□□ -0.23
TDP2-204ENST00000478507 HSPBP1Q9NZL4 362 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 CFAP97Q9P2B7 532 aa13.62□□□□□ -0.23
TDP2-204ENST00000478507 DSPP15924 2871 aaKnown RBP13.62□□□□□ -0.23
TDP2-204ENST00000478507 VPS37CA5D8V6 355 aaPredicted RBP13.61□□□□□ -0.23
TDP2-204ENST00000478507 TULP1O00294 542 aaPredicted RBP13.61□□□□□ -0.23
TDP2-204ENST00000478507 ALDH1A2O94788 518 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 TIE1P35590 1138 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 GNL1P36915 607 aaPredicted RBP13.61□□□□□ -0.23
TDP2-204ENST00000478507 STAT6P42226 847 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 GRIA2P42262 883 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 TRIM61Q5EBN2 209 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 SPDYCQ5MJ68 293 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 SLC23A3Q6PIS1 610 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 LPCAT2Q7L5N7 544 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 EPM2AIP1Q7L775 607 aaPredicted RBP13.61□□□□□ -0.23
TDP2-204ENST00000478507 PIP4P1Q86T03 277 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 SYT12Q8IV01 421 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 NOC3LQ8WTT2 800 aaKnown RBP13.61□□□□□ -0.23
TDP2-204ENST00000478507 HPS3Q969F9 1004 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 SCNM1Q9BWG6 230 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 ZNF518BQ9C0D4 1074 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 ELOVL4Q9GZR5 314 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 DPEP3Q9H4B8 488 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 KIAA1586Q9HCI6 787 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 HCN2Q9UL51 889 aa13.61□□□□□ -0.23
TDP2-204ENST00000478507 ADAMTS9Q9P2N4 1935 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 E2F8A0AVK6 867 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 TMEM8BA6NDV4 472 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 UPK3BL1B0FP48 263 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms