RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 PSMD2Q13200 908 aa13.84□□□□□ -0.19
ABCF3-212ENST00000478288 GAB4Q2WGN9 574 aa13.84□□□□□ -0.19
ABCF3-212ENST00000478288 HSF5Q4G112 596 aaPredicted RBP13.84□□□□□ -0.19
ABCF3-212ENST00000478288 MDH1BQ5I0G3 518 aa13.84□□□□□ -0.19
ABCF3-212ENST00000478288 GOLGA5Q8TBA6 731 aa13.84□□□□□ -0.19
ABCF3-212ENST00000478288 USP33Q8TEY7 942 aa13.84□□□□□ -0.19
ABCF3-212ENST00000478288 TMEM174Q8WUU8 243 aa13.84□□□□□ -0.19
ABCF3-212ENST00000478288 OVCA2Q8WZ82 227 aa13.84□□□□□ -0.19
ABCF3-212ENST00000478288 DHX58Q96C10 678 aa13.84□□□□□ -0.19
ABCF3-212ENST00000478288 SLITRK1Q96PX8 696 aa13.84□□□□□ -0.19
ABCF3-212ENST00000478288 MRPL45Q9BRJ2 306 aaKnown RBP13.84□□□□□ -0.19
ABCF3-212ENST00000478288 LINC00597Q9H2U6 94 aa13.84□□□□□ -0.19
ABCF3-212ENST00000478288 CACNA1EQ15878 2313 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 PCNX2A6NKB5 2137 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 K7EQS6 105 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 CYP17A1P05093 508 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 PTPN1P18031 435 aaKnown RBP13.83□□□□□ -0.2
ABCF3-212ENST00000478288 AP3M2P53677 418 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 MRPS21P82921 87 aaKnown RBP13.83□□□□□ -0.2
ABCF3-212ENST00000478288 WDR72Q3MJ13 1102 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 STPG1Q5TH74 334 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 TDRD10Q5VZ19 366 aaKnown RBP13.83□□□□□ -0.2
ABCF3-212ENST00000478288 SHC4Q6S5L8 630 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 B3GALNT2Q8NCR0 500 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 PDZD8Q8NEN9 1154 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 TSTD1Q8NFU3 115 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 OR6B3Q8NGW1 331 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 SYAP1Q96A49 352 aaPredicted RBP13.83□□□□□ -0.2
ABCF3-212ENST00000478288 CNOT6LQ96LI5 555 aaKnown RBP13.83□□□□□ -0.2
ABCF3-212ENST00000478288 GZF1Q9H116 711 aaPredicted RBP13.83□□□□□ -0.2
ABCF3-212ENST00000478288 XYLT2Q9H1B5 865 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 MMP17Q9ULZ9 603 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 NME7Q9Y5B8 376 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 ZZEF1O43149 2961 aa13.83□□□□□ -0.2
ABCF3-212ENST00000478288 A0A0A0MRY4 1105 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 PVALEFA0A1B0GWK0 134 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 BCLAF3A2AJT9 711 aaKnown RBP13.82□□□□□ -0.2
ABCF3-212ENST00000478288 RTN3O95197 1032 aaPredicted RBP13.82□□□□□ -0.2
ABCF3-212ENST00000478288 ADH1CP00326 375 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 CHRM1P11229 460 aaPredicted RBP13.82□□□□□ -0.2
ABCF3-212ENST00000478288 PMLP29590 882 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 TUBP50607 506 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 DGKEP52429 567 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 CLDN10P78369 228 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 SHC2P98077 582 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 TAF10Q12962 218 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 TRPC3Q13507 836 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 USP39Q53GS9 565 aaKnown RBP13.82□□□□□ -0.2
ABCF3-212ENST00000478288 SNX30Q5VWJ9 437 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 PMS2CLQ68D20 193 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 FILIP1Q7Z7B0 1213 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 ADGRG2Q8IZP9 1017 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 TTC16Q8NEE8 873 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 CCDC127Q96BQ5 260 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 OTUB2Q96DC9 234 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 LSM14BQ9BX40 385 aaKnown RBP13.82□□□□□ -0.2
ABCF3-212ENST00000478288 RNF38Q9H0F5 515 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 RXFP3Q9NSD7 469 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 TMEM30AQ9NV96 361 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 POLR3BQ9NW08 1133 aaPredicted RBP13.82□□□□□ -0.2
ABCF3-212ENST00000478288 TBC1D14Q9P2M4 693 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 CPQQ9Y646 472 aa13.82□□□□□ -0.2
ABCF3-212ENST00000478288 TNRC6BQ9UPQ9 1833 aaKnown RBP13.82□□□□□ -0.2
ABCF3-212ENST00000478288 FAM92AA1XBS5 289 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 A8MXQ7 604 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.81□□□□□ -0.2
ABCF3-212ENST00000478288 YWHAQP27348 245 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 CYP2J2P51589 502 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 CACNA2D1P54289 1103 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 DHCR24Q15392 516 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 CCDC6Q16204 474 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 CRY1Q16526 586 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 KNOP1Q1ED39 458 aaKnown RBP13.81□□□□□ -0.2
ABCF3-212ENST00000478288 ATL3Q6DD88 541 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 NUP93Q8N1F7 819 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 RDH13Q8NBN7 331 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 ZNF516Q92618 1163 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 ZNF518BQ9C0D4 1074 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 DPEP3Q9H4B8 488 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 COMMD8Q9NX08 183 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 IL37Q9NZH6 218 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 TFIP11Q9UBB9 837 aaKnown RBP13.81□□□□□ -0.2
ABCF3-212ENST00000478288 ATP8B3O60423 1300 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 WDFY3Q8IZQ1 3526 aa13.81□□□□□ -0.2
ABCF3-212ENST00000478288 E2F8A0AVK6 867 aa13.8□□□□□ -0.2
ABCF3-212ENST00000478288 CLIC2O15247 247 aa13.8□□□□□ -0.2
ABCF3-212ENST00000478288 POLR2DO15514 142 aaKnown RBP13.8□□□□□ -0.2
ABCF3-212ENST00000478288 CAVIN2O95810 425 aa13.8□□□□□ -0.2
ABCF3-212ENST00000478288 MYL6P60660 151 aa13.8□□□□□ -0.2
ABCF3-212ENST00000478288 C2orf27AQ580R0 203 aa13.8□□□□□ -0.2
ABCF3-212ENST00000478288 RNF43Q68DV7 783 aa13.8□□□□□ -0.2
ABCF3-212ENST00000478288 SLC9A9Q8IVB4 645 aa13.8□□□□□ -0.2
ABCF3-212ENST00000478288 NELFCDQ8IXH7 590 aa13.8□□□□□ -0.2
ABCF3-212ENST00000478288 OLIG1Q8TAK6 271 aa13.8□□□□□ -0.2
ABCF3-212ENST00000478288 KCNV2Q8TDN2 545 aa13.8□□□□□ -0.2
ABCF3-212ENST00000478288 TNIP3Q96KP6 325 aa13.8□□□□□ -0.2
ABCF3-212ENST00000478288 PNKPQ96T60 521 aa13.8□□□□□ -0.2
ABCF3-212ENST00000478288 B3GNT5Q9BYG0 378 aa13.8□□□□□ -0.2
ABCF3-212ENST00000478288 DMAP1Q9NPF5 467 aaPredicted RBP13.8□□□□□ -0.2
ABCF3-212ENST00000478288 CFAP97Q9P2B7 532 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms