RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 PHKA1P46020 1223 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 MTHFSP49914 203 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 COL10A1Q03692 680 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 PIGFQ07326 219 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 AMOTQ4VCS5 1084 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 PLEKHO1Q53GL0 409 aaPredicted RBP5.75□□□□□ -1.49
VPS50-214ENST00000477935 CCDC157Q569K6 752 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 PPP1R3BQ86XI6 285 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 ANKRD13AQ8IZ07 590 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 SH2D3CQ8N5H7 860 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 CNBD1Q8NA66 436 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 NSUN7Q8NE18 718 aaKnown RBP5.75□□□□□ -1.49
VPS50-214ENST00000477935 DIS3LQ8TF46 1054 aaKnown RBP5.75□□□□□ -1.49
VPS50-214ENST00000477935 LINC00476Q8WZB0 136 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 TNPO1Q92973 898 aaKnown RBP5.75□□□□□ -1.49
VPS50-214ENST00000477935 SCAMP4Q969E2 229 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 CAVIN3Q969G5 261 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 C1GALT1C1Q96EU7 318 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 LRGUKQ96M69 825 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 Q96MF0 132 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 VKORC1Q9BQB6 163 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 GLIS2Q9BZE0 524 aaPredicted RBP5.75□□□□□ -1.49
VPS50-214ENST00000477935 VPS33BQ9H267 617 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 GPR35Q9HC97 309 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 NEU2Q9Y3R4 380 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 CARMIL3Q8ND23 1372 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 CDHR2Q9BYE9 1310 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 TRGV11A0A075B6L2 103 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 PRAMEF33A0A0G2JMD5 474 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 CCDC195A0A1B0GUA6 201 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 A0A1W2PPC1 479 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 FYB1O15117 783 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 PRAMEF10O60809 474 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 RHOBTB3O94955 611 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 STARD3NLO95772 234 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 SEC24CP53992 1094 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 NKX6-1P78426 367 aaPredicted RBP5.74□□□□□ -1.49
VPS50-214ENST00000477935 PURAQ00577 322 aaKnown RBP5.74□□□□□ -1.49
VPS50-214ENST00000477935 FOXI1Q12951 378 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 GTF2H3Q13889 308 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 PLS1Q14651 629 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 KIF22Q14807 665 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 SP5Q6BEB4 398 aaPredicted RBP5.74□□□□□ -1.49
VPS50-214ENST00000477935 CLNKQ7Z7G1 428 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 DNAJC10Q8IXB1 793 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 SLC44A3Q8N4M1 653 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 PTCD3Q96EY7 689 aaKnown RBP5.74□□□□□ -1.49
VPS50-214ENST00000477935 SLC35A4Q96G79 324 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 CDK5RAP3Q96JB5 506 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 CGRRF1Q99675 332 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 SMOQ99835 787 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 SLITRK6Q9H5Y7 841 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 GBA2Q9HCG7 927 aaPredicted RBP5.74□□□□□ -1.49
VPS50-214ENST00000477935 PNPOQ9NVS9 261 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 ZDHHC8Q9ULC8 765 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 COL15A1P39059 1388 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 DLEC1Q9Y238 1755 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 MYH14Q7Z406 1995 aaKnown RBP5.74□□□□□ -1.49
VPS50-214ENST00000477935 RANBP2P49792 3224 aaKnown RBP5.74□□□□□ -1.49
VPS50-214ENST00000477935 NRXN2Q9P2S2 1712 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 NCAPD2Q15021 1401 aa5.74□□□□□ -1.49
VPS50-214ENST00000477935 H0YGN5 161 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 H3BUI4 141 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 TOR1BO14657 336 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 SUN1O94901 812 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 AHSGP02765 367 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 RARBP10826 455 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 LPOP22079 712 aaPredicted RBP5.73□□□□□ -1.49
VPS50-214ENST00000477935 IL12RB1P42701 662 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 ZNF135P52742 658 aaPredicted RBP5.73□□□□□ -1.49
VPS50-214ENST00000477935 EIF5P55010 431 aaKnown RBP5.73□□□□□ -1.49
VPS50-214ENST00000477935 RPS7P62081 194 aaKnown RBP5.73□□□□□ -1.49
VPS50-214ENST00000477935 POU6F2P78424 691 aaPredicted RBP5.73□□□□□ -1.49
VPS50-214ENST00000477935 HABP2Q14520 560 aaPredicted RBP5.73□□□□□ -1.49
VPS50-214ENST00000477935 NFE2Q16621 373 aaPredicted RBP5.73□□□□□ -1.49
VPS50-214ENST00000477935 TBC1D9BQ66K14 1250 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 TAPT1Q6NXT6 567 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 B3GNT9Q6UX72 402 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 EPM2AIP1Q7L775 607 aaPredicted RBP5.73□□□□□ -1.49
VPS50-214ENST00000477935 TMPRSS9Q7Z410 1059 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 CAMKK1Q8N5S9 505 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 GPR150Q8NGU9 434 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 SLC35G2Q8TBE7 412 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 SSH3Q8TE77 659 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 TMEM125Q96AQ2 219 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 LRIG1Q96JA1 1093 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 TRIB1Q96RU8 372 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 CASS4Q9NQ75 786 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 STXBP5LQ9Y2K9 1186 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 PCDHA1Q9Y5I3 950 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 ARHGEF17Q96PE2 2063 aaPredicted RBP5.73□□□□□ -1.49
VPS50-214ENST00000477935 TRPM7Q96QT4 1865 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 MAST3O60307 1309 aa5.73□□□□□ -1.49
VPS50-214ENST00000477935 KIAA0100Q14667 2235 aaKnown RBP5.72□□□□□ -1.49
VPS50-214ENST00000477935 COL5A3P25940 1745 aaPredicted RBP5.72□□□□□ -1.49
VPS50-214ENST00000477935 SCGB1D2O95969 90 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 CHEK2O96017 543 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 TM4SF4P48230 202 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 MC2RQ01718 297 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 FPGSQ05932 587 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms