RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 CAPN8A6NHC0 703 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 SPDYE16A6NNV3 312 aaPredicted RBP13.99□□□□□ -0.17
DFFB-209ENST00000477548 AP1G1O43747 822 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 SSTR3P32745 418 aaPredicted RBP13.99□□□□□ -0.17
DFFB-209ENST00000477548 CA8P35219 290 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 CPOXP36551 454 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 GPC3P51654 580 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 NCKAP1LP55160 1127 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 SLC18A2Q05940 514 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 SNRNP35Q16560 246 aaKnown RBP13.99□□□□□ -0.17
DFFB-209ENST00000477548 RALGPS1Q5JS13 557 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 PADI6Q6TGC4 694 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 TMC7Q7Z402 723 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 ZFP28Q8NHY6 868 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 JDP2Q8WYK2 163 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 JADE3Q92613 823 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 MAML3Q96JK9 1138 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 CYP4F11Q9HBI6 524 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 DDX4Q9NQI0 724 aaKnown RBP13.99□□□□□ -0.17
DFFB-209ENST00000477548 PAIP2BQ9ULR5 123 aaKnown RBP13.99□□□□□ -0.17
DFFB-209ENST00000477548 DMTF1Q9Y222 760 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 PMM2O15305 246 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 SERPINA6P08185 405 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 ATP2B4P23634 1241 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 FDFT1P37268 417 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 MAMLD1Q13495 774 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 ALCAMQ13740 583 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 OASLQ15646 514 aaKnown RBP13.99□□□□□ -0.17
DFFB-209ENST00000477548 SHROOM1Q2M3G4 852 aaPredicted RBP13.99□□□□□ -0.17
DFFB-209ENST00000477548 ANO5Q75V66 913 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 TMEM110Q86TL2 294 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 PDIK1LQ8N165 341 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 METTL25Q8N6Q8 603 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 POU5F2Q8N7G0 328 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 ZBTB8BQ8NAP8 495 aaPredicted RBP13.99□□□□□ -0.17
DFFB-209ENST00000477548 CPT1BQ92523 772 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 ACSF2Q96CM8 615 aaPredicted RBP13.99□□□□□ -0.17
DFFB-209ENST00000477548 WDR83Q9BRX9 315 aaKnown RBP13.99□□□□□ -0.17
DFFB-209ENST00000477548 LXNQ9BS40 222 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 WDR18Q9BV38 432 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 Q9H521 79 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 C10orf88Q9H8K7 445 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 TMEM8AQ9HCN3 771 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 SH3GLB1Q9Y371 365 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 DAGLAQ9Y4D2 1042 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 FARP1Q9Y4F1 1045 aaPredicted RBP13.99□□□□□ -0.17
DFFB-209ENST00000477548 SNCAIPQ9Y6H5 919 aa13.99□□□□□ -0.17
DFFB-209ENST00000477548 IGLV3-22A0A075B6J6 115 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 PPEF1O14829 653 aaPredicted RBP13.98□□□□□ -0.17
DFFB-209ENST00000477548 PSMD10O75832 226 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 SORBS2O94875 1100 aaKnown RBP13.98□□□□□ -0.17
DFFB-209ENST00000477548 TCF4P15884 667 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 SHMT1P34896 483 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 RPL26P61254 145 aaKnown RBP13.98□□□□□ -0.17
DFFB-209ENST00000477548 BTKQ06187 659 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 TLR1Q15399 786 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 SH3D19Q5HYK7 790 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 TRIM67Q6ZTA4 783 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 MON1BQ7L1V2 547 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 C12orf56Q8IXR9 622 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 ZFRQ96KR1 1074 aaKnown RBP13.98□□□□□ -0.17
DFFB-209ENST00000477548 C17orf75Q9HAS0 396 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 INPP5FQ9Y2H2 1132 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 ZNF711Q9Y462 761 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 MAD1L1Q9Y6D9 718 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 CDK5RAP2Q96SN8 1893 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 BBOX1O75936 387 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 ITGAVP06756 1048 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 CACNB3P54284 484 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 MYLK3Q32MK0 819 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 KBTBD12Q3ZCT8 623 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 SPOCD1Q6ZMY3 1216 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 CDHR3Q6ZTQ4 885 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 NUDCD3Q8IVD9 361 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 PHF12Q96QT6 1004 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 EBF4Q9BQW3 602 aa13.98□□□□□ -0.17
DFFB-209ENST00000477548 CCNT2O60583 730 aaKnown RBP13.97□□□□□ -0.17
DFFB-209ENST00000477548 HOXA10P31260 410 aaPredicted RBP13.97□□□□□ -0.17
DFFB-209ENST00000477548 YWHAGP61981 247 aaKnown RBP eCLIP13.97□□□□□ -0.17
DFFB-209ENST00000477548 DYNLT1P63172 113 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 UBXN2AP68543 259 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 DIS3LQ8TF46 1054 aaKnown RBP13.97□□□□□ -0.17
DFFB-209ENST00000477548 MRPS26Q9BYN8 205 aaKnown RBP13.97□□□□□ -0.17
DFFB-209ENST00000477548 SLC13A1Q9BZW2 595 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 ARHGEF38Q9NXL2 777 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 XPO7Q9UIA9 1087 aaKnown RBP13.97□□□□□ -0.17
DFFB-209ENST00000477548 APPL1Q9UKG1 709 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 SSX2IPQ9Y2D8 614 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 PCDHB2Q9Y5E7 798 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 PROCP04070 461 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 COPAP53621 1224 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 KRT81Q14533 505 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 PUS10Q3MIT2 529 aaKnown RBP13.97□□□□□ -0.17
DFFB-209ENST00000477548 SLC44A4Q53GD3 710 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 SLC27A3Q5K4L6 730 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 TCHHL1Q5QJ38 904 aaPredicted RBP13.97□□□□□ -0.17
DFFB-209ENST00000477548 LRRC8BQ6P9F7 803 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 HAUS6Q7Z4H7 955 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 MARVELD2Q8N4S9 558 aa13.97□□□□□ -0.17
DFFB-209ENST00000477548 NKD2Q969F2 451 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms