RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CLEC1BQ9P126 229 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 SLC5A3P53794 718 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 FMO1Q01740 532 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 DLX2Q07687 328 aaPredicted RBP16.18■□□□□ 0.18
SEC13-215ENST00000477547 IFRD2Q12894 506 aaPredicted RBP16.18■□□□□ 0.18
SEC13-215ENST00000477547 ARID5BQ14865 1188 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 TSR1Q2NL82 804 aaKnown RBP16.18■□□□□ 0.18
SEC13-215ENST00000477547 TMC5Q6UXY8 1006 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 HFE2Q6ZVN8 426 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 GPRIN1Q7Z2K8 1008 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 ITIH5Q86UX2 942 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 PIGZQ86VD9 579 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 TC2NQ8N9U0 490 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 C1orf131Q8NDD1 294 aaKnown RBP16.18■□□□□ 0.18
SEC13-215ENST00000477547 CMASQ8NFW8 434 aaPredicted RBP16.18■□□□□ 0.18
SEC13-215ENST00000477547 SMG7Q92540 1137 aaKnown RBP16.18■□□□□ 0.18
SEC13-215ENST00000477547 SPATA17Q96L03 361 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 PRKD2Q9BZL6 878 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 HAUS4Q9H6D7 363 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 PNPLA8Q9NP80 782 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 ZNHIT6Q9NWK9 470 aaKnown RBP16.18■□□□□ 0.18
SEC13-215ENST00000477547 IMPACTQ9P2X3 320 aa16.18■□□□□ 0.18
SEC13-215ENST00000477547 ZNF318Q5VUA4 2279 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 DOCK8Q8NF50 2099 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 CCDC195A0A1B0GUA6 201 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 SLC38A8A6NNN8 435 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 TULP2O00295 520 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 LSM8O95777 96 aaKnown RBP16.17■□□□□ 0.18
SEC13-215ENST00000477547 SERPING1P05155 500 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 POU2F2P09086 479 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 CSH1P0DML2 217 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 CSH2P0DML3 217 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 SKILP12757 684 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 HOXB8P17481 243 aaPredicted RBP16.17■□□□□ 0.18
SEC13-215ENST00000477547 CHRNB2P17787 502 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 HNRNPH3P31942 346 aaKnown RBP16.17■□□□□ 0.18
SEC13-215ENST00000477547 LTBRP36941 435 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 PLA2G4AP47712 749 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 RGS7P49802 495 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 MTMR3Q13615 1198 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 CLUL1Q15846 466 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 TAF12Q16514 161 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 HGSNATQ68CP4 663 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 SYCE2Q6PIF2 218 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 TRIM72Q6ZMU5 477 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 DENND5BQ6ZUT9 1274 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 FEZF2Q8TBJ5 459 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 PSMG2Q969U7 264 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 ZNF707Q96C28 371 aaPredicted RBP16.17■□□□□ 0.18
SEC13-215ENST00000477547 CEP295NLQ96MC4 621 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 AGPAT1Q99943 283 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 KCNH6Q9H252 994 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 PIDD1Q9HB75 910 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 MAGED2Q9UNF1 606 aaPredicted RBP16.17■□□□□ 0.18
SEC13-215ENST00000477547 ASB3Q9Y575 518 aa16.17■□□□□ 0.18
SEC13-215ENST00000477547 FAM170AA1A519 330 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 HHLA1C9JL84 531 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 PLEKP08567 350 aaPredicted RBP16.16■□□□□ 0.18
SEC13-215ENST00000477547 GPD2P43304 727 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 NOMO3P69849 1222 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 ADIGQ0VDE8 80 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 PDCLQ13371 301 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 NAA35Q5VZE5 725 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 ZNF571Q7Z3V5 609 aaPredicted RBP16.16■□□□□ 0.18
SEC13-215ENST00000477547 TMEM35BQ8NCS4 154 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 OLIG1Q8TAK6 271 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 MSLNLQ96KJ4 702 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 NOX5Q96PH1 765 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 SYT11Q9BT88 431 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 LHX5Q9H2C1 402 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 ASAH2Q9NR71 780 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 ST7Q9NRC1 585 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 HCFC1R1Q9NWW0 138 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 CD207Q9UJ71 328 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 BZW2Q9Y6E2 419 aaKnown RBP16.16■□□□□ 0.18
SEC13-215ENST00000477547 TRIOO75962 3097 aa16.16■□□□□ 0.18
SEC13-215ENST00000477547 C5orf42Q9H799 3197 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 RTN3O95197 1032 aaPredicted RBP16.15■□□□□ 0.18
SEC13-215ENST00000477547 PAPLNO95428 1278 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 CDH5P33151 784 aaPredicted RBP16.15■□□□□ 0.18
SEC13-215ENST00000477547 ZP2Q05996 745 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 CES5AQ6NT32 575 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 PMF1Q6P1K2 205 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 WDR59Q6PJI9 974 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 VPS36Q86VN1 386 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 NUP93Q8N1F7 819 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 SIX6OS1Q8N1H7 587 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 IPO4Q8TEX9 1081 aaKnown RBP16.15■□□□□ 0.18
SEC13-215ENST00000477547 SLC35F5Q8WV83 523 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 ZNF512Q96ME7 567 aaPredicted RBP16.15■□□□□ 0.18
SEC13-215ENST00000477547 CORO1BQ9BR76 489 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 LRRC4Q9HBW1 653 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 ZNF334Q9HCZ1 680 aaPredicted RBP16.15■□□□□ 0.18
SEC13-215ENST00000477547 EHD2Q9NZN4 543 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 ARHGAP20Q9P2F6 1191 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 CYTH4Q9UIA0 394 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 CDH22Q9UJ99 828 aa16.15■□□□□ 0.18
SEC13-215ENST00000477547 TNFRSF10BO14763 440 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 CYP1A1P04798 512 aaPredicted RBP16.14■□□□□ 0.17
SEC13-215ENST00000477547 HMGA1P17096 107 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms