RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ZNF804AQ7Z570 1209 aa5.09□□□□□ -1.59
UBR3-209ENST00000477461 IP6K2Q9UHH9 426 aa5.09□□□□□ -1.59
UBR3-209ENST00000477461 TBC1D30Q9Y2I9 924 aa5.09□□□□□ -1.59
UBR3-209ENST00000477461 NEO1Q92859 1461 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 AKNAQ7Z591 1439 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 PROB1E7EW31 1015 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 VNN1O95497 513 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 TUBB4AP04350 444 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 NPSP0C0P6 89 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 MMP13P45452 471 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 RAB27AP51159 221 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 UCP3P55916 312 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 GPSM2P81274 684 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 RABEP1Q15276 862 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 LY6KQ17RY6 165 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 Q6ZWC4 215 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 PLBD2Q8NHP8 589 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 CDK5RAP3Q96JB5 506 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 ASB2Q96Q27 587 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 CGRRF1Q99675 332 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 RHOBTB2Q9BYZ6 727 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 ELOVL5Q9NYP7 299 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 TMX2Q9Y320 296 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 PLEKHM1Q9Y4G2 1056 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 FER1L4A9Z1Z3 1794 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 SAMD9LQ8IVG5 1584 aa5.08□□□□□ -1.6
UBR3-209ENST00000477461 ADGRL1O94910 1474 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 TCOF1Q13428 1488 aaKnown RBP5.07□□□□□ -1.6
UBR3-209ENST00000477461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.07□□□□□ -1.6
UBR3-209ENST00000477461 ZNF644Q9H582 1327 aaPredicted RBP5.07□□□□□ -1.6
UBR3-209ENST00000477461 AP4M1O00189 453 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 MOSPD3O75425 235 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 TSPY4P0CV99 314 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 TSPY10P0CW01 314 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 U2AF1L5P0DN76 240 aaPredicted RBP5.07□□□□□ -1.6
UBR3-209ENST00000477461 ALDH5A1P51649 535 aaPredicted RBP5.07□□□□□ -1.6
UBR3-209ENST00000477461 KRTAP10-9P60411 292 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 U2AF1Q01081 240 aaKnown RBP eCLIP5.07□□□□□ -1.62e-6■■■■□ 19.7
UBR3-209ENST00000477461 ZNF267Q14586 743 aaPredicted RBP5.07□□□□□ -1.6
UBR3-209ENST00000477461 MIS18BP1Q6P0N0 1132 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 TRIM72Q6ZMU5 477 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 DPY19L3Q6ZPD9 716 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 AIFM3Q96NN9 605 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 LENG8Q96PV6 779 aaPredicted RBP5.07□□□□□ -1.6
UBR3-209ENST00000477461 MAP3K14Q99558 947 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 P2RX7Q99572 595 aaKnown RBP5.07□□□□□ -1.6
UBR3-209ENST00000477461 DPCDQ9BVM2 203 aaPredicted RBP5.07□□□□□ -1.6
UBR3-209ENST00000477461 FSD1LQ9BXM9 530 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 KLHL13Q9P2N7 655 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 SH2B3Q9UQQ2 575 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 EID1Q9Y6B2 187 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 PPRC1Q5VV67 1664 aaKnown RBP5.07□□□□□ -1.6
UBR3-209ENST00000477461 ABCC1P33527 1531 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 SYCP2Q9BX26 1530 aa5.07□□□□□ -1.6
UBR3-209ENST00000477461 SCAPERQ9BY12 1400 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 DNMT1P26358 1616 aaKnown RBP5.06□□□□□ -1.6
UBR3-209ENST00000477461 MYO1CO00159 1063 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 PPEF2O14830 753 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 IKBKBO14920 756 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 TOP3BO95985 862 aaKnown RBP5.06□□□□□ -1.6
UBR3-209ENST00000477461 PF4V1P10720 104 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 PPIFP30405 207 aaKnown RBP5.06□□□□□ -1.6
UBR3-209ENST00000477461 MYO1EQ12965 1108 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 GTF2H3Q13889 308 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 TBC1D25Q3MII6 688 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 ZIK1Q3SY52 487 aaPredicted RBP5.06□□□□□ -1.6
UBR3-209ENST00000477461 EMC10Q5UCC4 262 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 SERPINA13PQ6UXR4 307 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 SLC15A4Q8N697 577 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 ABHD11Q8NFV4 315 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 HPS3Q969F9 1004 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 DAZAP1Q96EP5 407 aaKnown RBP5.06□□□□□ -1.6
UBR3-209ENST00000477461 RITA1Q96K30 269 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 MOGAT1Q96PD6 335 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 RTFDC1Q9BY42 306 aaPredicted RBP5.06□□□□□ -1.6
UBR3-209ENST00000477461 VPS16Q9H269 839 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 CXorf36Q9H7Y0 433 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 ANLNQ9NQW6 1124 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 ZIM2Q9NZV7 527 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 SHOC2Q9UQ13 582 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 ARHGEF5Q12774 1597 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 DENND4BO75064 1496 aaPredicted RBP5.06□□□□□ -1.6
UBR3-209ENST00000477461 CCDC141Q6ZP82 1450 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 DAPK1P53355 1430 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 KIAA1107Q9UPP5 1409 aa5.06□□□□□ -1.6
UBR3-209ENST00000477461 CROCC2H7BZ55 1655 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 WDR17Q8IZU2 1322 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 MYO1FO00160 1098 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 FPR3P25089 353 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 CTGFP29279 349 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 SLC11A2P49281 568 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 TPTEP56180 551 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 KRT17Q04695 432 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 NXNQ6DKJ4 435 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 CXorf57Q6NSI4 855 aaKnown RBP5.05□□□□□ -1.6
UBR3-209ENST00000477461 SLC15A3Q8IY34 581 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 TERB1Q8NA31 727 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 C8orf58Q8NAV2 365 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 RP9Q8TA86 221 aaKnown RBP5.05□□□□□ -1.6
UBR3-209ENST00000477461 TMEM171Q8WVE6 324 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms