RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	RRN3P2	A6NIE6	340 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	FAM47E-STBD1	D6RA91	191 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	FAM86B1	E9PN63	330 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289		M0QZ92	97 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MUSK	O15146	869 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MSH4	O15457	936 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	DTNB	O60941	627 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ARIH2	O95376	493 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MMP3	P08254	477 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	FAM86B2	P0C5J1	330 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ZNF888	P0CJ79	500 aa	Predicted RBP	5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	AR	P10275	920 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TMOD1	P28289	359 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TCF7	P36402	384 aa	Predicted RBP	5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PRPH	P41219	470 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	UBA7	P41226	1012 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	DNM2	P50570	870 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ACLY	P53396	1101 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SOX10	P56693	466 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ACTR2	P61160	394 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PSMC5	P62195	406 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	BEX3	Q00994	111 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CEBPZ	Q03701	1054 aa	Known RBP	5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ARHGAP1	Q07960	439 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	IFRD2	Q12894	506 aa	Predicted RBP	5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ITGA7	Q13683	1181 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	RAB33A	Q14088	237 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ARL6IP4	Q66PJ3	421 aa	Known RBP	5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SWSAP1	Q6NVH7	229 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CCDC62	Q6P9F0	684 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	REXO1L1P	Q8IX06	675 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TRPV1	Q8NER1	839 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	KCNG4	Q8TDN1	519 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	FERMT2	Q96AC1	680 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PAWR	Q96IZ0	340 aa	Known RBP	5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	IPO9	Q96P70	1041 aa	Known RBP	5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PYM1	Q9BRP8	204 aa	Known RBP	5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TACO1	Q9BSH4	297 aa	Known RBP	5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	NT5C3A	Q9H0P0	336 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TTC12	Q9H892	705 aa	Predicted RBP	5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SLC39A2	Q9NP94	309 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	LRWD1	Q9UFC0	647 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TESMIN	Q9Y4I5	508 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TRAF6	Q9Y4K3	522 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	DOCK3	Q8IZD9	2030 aa		5	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ASTN1	O14525	1302 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	KDM3A	Q9Y4C1	1321 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	IGLV3-22	A0A075B6J6	115 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	VWA3A	A6NCI4	1184 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	FAM90A27P	A6NNH2	459 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	KIF28P	B7ZC32	967 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289		H0Y858	1186 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ARVCF	O00192	962 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SPTLC2	O15270	562 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SLC26A4	O43511	780 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	HBP1	O60381	514 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ATP9A	O75110	1047 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	YEATS4	O95619	227 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	LGALS2	P05162	132 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	KCNA2	P16389	499 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	EN2	P19622	333 aa	Predicted RBP	4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MUT	P22033	750 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	LONP1	P36776	959 aa	Known RBP	4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CCT6A	P40227	531 aa	Known RBP	4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TEC	P42680	631 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	QARS	P47897	775 aa	Known RBP	4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ME1	P48163	572 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PURA	Q00577	322 aa	Known RBP	4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	REST	Q13127	1097 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PPP2R5C	Q13362	524 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	BFSP2	Q13515	415 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	FHL2	Q14192	279 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PDIA5	Q14554	519 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	EPHA7	Q15375	998 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ZRSR1	Q15695	479 aa	Known RBP	4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	NPY5R	Q15761	445 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	KIAA0753	Q2KHM9	967 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	HSDL1	Q3SXM5	330 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ZNF484	Q5JVG2	852 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ODR4	Q5SWX8	454 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	NFRKB	Q6P4R8	1299 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CXCL17	Q6UXB2	119 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PLPPR4	Q7Z2D5	763 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TPH2	Q8IWU9	490 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	KLHDC9	Q8NEP7	349 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CYP2W1	Q8TAV3	490 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CRYGN	Q8WXF5	182 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SLC5A5	Q92911	643 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	AK8	Q96MA6	479 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MBOAT7	Q96N66	472 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	LRRC37B	Q96QE4	947 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	LMF1	Q96S06	567 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	LRRC27	Q9C0I9	530 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ZSWIM4	Q9H7M6	989 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TUFT1	Q9NNX1	390 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	GABBR1	Q9UBS5	961 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	DNM3	Q9UQ16	869 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MTMR6	Q9Y217	621 aa		4.99	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms