RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 SAYSD1Q9NPB0 183 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 FAM49BQ9NUQ9 324 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 DDX20Q9UHI6 824 aaKnown RBP12.04□□□□□ -0.48
NUP188-205ENST00000477069 ANKRD65E5RJM6 399 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 ALOX15BO15296 676 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 CREB1P16220 341 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 IL4RP24394 825 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 SOX4Q06945 474 aaPredicted RBP12.04□□□□□ -0.48
NUP188-205ENST00000477069 NOMO1Q15155 1222 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 YTHDF3Q7Z739 585 aaKnown RBP12.04□□□□□ -0.48
NUP188-205ENST00000477069 RFX6Q8HWS3 928 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 CRYBG2Q8N1P7 616 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 CPT1BQ92523 772 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 ARHGEF2Q92974 986 aaKnown RBP12.04□□□□□ -0.48
NUP188-205ENST00000477069 CHMP6Q96FZ7 201 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 CFAP57Q96MR6 1250 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 TTC25Q96NG3 672 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 FAM107BQ9H098 131 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 RNF39Q9H2S5 420 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.04□□□□□ -0.48
NUP188-205ENST00000477069 RNF19AQ9NV58 838 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 PIN4Q9Y237 131 aaKnown RBP12.04□□□□□ -0.48
NUP188-205ENST00000477069 TSC2P49815 1807 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 CD4P01730 458 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 ATP5DP30049 168 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 RPL22P35268 128 aaKnown RBP12.03□□□□□ -0.48
NUP188-205ENST00000477069 CRYBB1P53674 252 aaPredicted RBP12.03□□□□□ -0.48
NUP188-205ENST00000477069 BEX3Q00994 111 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 MMRN1Q13201 1228 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 FBXO47Q5MNV8 452 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 PCGF5Q86SE9 256 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 SESTD1Q86VW0 696 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 ZDHHC17Q8IUH5 632 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 UNC45BQ8IWX7 931 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 SMG8Q8ND04 991 aaKnown RBP12.03□□□□□ -0.48
NUP188-205ENST00000477069 TEKT4Q8WW24 435 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 A0A087WUV0 522 aaPredicted RBP12.03□□□□□ -0.48
NUP188-205ENST00000477069 CDH16O75309 829 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 GRAP2O75791 330 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 CTCFP49711 727 aaPredicted RBP12.03□□□□□ -0.48
NUP188-205ENST00000477069 HUNKP57058 714 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 PLCB3Q01970 1234 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 ANKRD22Q5VYY1 191 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 VSIG1Q86XK7 387 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 TDRPQ86YL5 185 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 ARRDC4Q8NCT1 418 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 MAML1Q92585 1016 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 TRIM6Q9C030 488 aaPredicted RBP12.03□□□□□ -0.48
NUP188-205ENST00000477069 INTS9Q9NV88 658 aaKnown RBP12.03□□□□□ -0.48
NUP188-205ENST00000477069 NAALADL1Q9UQQ1 740 aa12.03□□□□□ -0.48
NUP188-205ENST00000477069 SCN10AQ9Y5Y9 1956 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 MANSC4A6NHS7 340 aaPredicted RBP12.02□□□□□ -0.48
NUP188-205ENST00000477069 FOXO6A8MYZ6 492 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 KPNA7A9QM74 516 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 E7ESA3 106 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 ECM2O94769 699 aaPredicted RBP12.02□□□□□ -0.48
NUP188-205ENST00000477069 MYL3P08590 195 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 PURAQ00577 322 aaKnown RBP12.02□□□□□ -0.48
NUP188-205ENST00000477069 GAD2Q05329 585 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 ARCQ7LC44 396 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 SCUBE3Q8IX30 993 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 PPIL6Q8IXY8 311 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 RIBC1Q8N443 379 aaPredicted RBP12.02□□□□□ -0.48
NUP188-205ENST00000477069 OR6B3Q8NGW1 331 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 APBA2Q99767 749 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 PRMT1Q99873 361 aaKnown RBP12.02□□□□□ -0.48
NUP188-205ENST00000477069 WDR83Q9BRX9 315 aaKnown RBP12.02□□□□□ -0.48
NUP188-205ENST00000477069 APOL6Q9BWW8 343 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 CALN1Q9BXU9 219 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 KLK14Q9P0G3 267 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 ZMYND8Q9ULU4 1186 aaPredicted RBP12.02□□□□□ -0.48
NUP188-205ENST00000477069 IPPQ9Y573 584 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 ACTL7BQ9Y614 415 aa12.02□□□□□ -0.48
NUP188-205ENST00000477069 C17orf102A2RUQ5 167 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 IFNB1P01574 187 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 LMO2P25791 158 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 SCNN1AP37088 669 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 CDH6P55285 790 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 EIF3EP60228 445 aaKnown RBP12.02□□□□□ -0.49
NUP188-205ENST00000477069 CBLBQ13191 982 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 TAF1CQ15572 869 aaPredicted RBP12.02□□□□□ -0.49
NUP188-205ENST00000477069 ZNF618Q5T7W0 954 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 NPNTQ6UXI9 565 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 NME8Q8N427 588 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 PQLC3Q8N755 202 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 ANKRD52Q8NB46 1076 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 FAM172AQ8WUF8 416 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 CENPIQ92674 756 aaPredicted RBP12.02□□□□□ -0.49
NUP188-205ENST00000477069 FAF2Q96CS3 445 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 SEC16BQ96JE7 1060 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 ZNF560Q96MR9 790 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 RNF157Q96PX1 679 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 KATNAL1Q9BW62 490 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 B3GNT5Q9BYG0 378 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 ADAM33Q9BZ11 813 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 CYLDQ9NQC7 956 aa12.02□□□□□ -0.49
NUP188-205ENST00000477069 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.01□□□□□ -0.49
NUP188-205ENST00000477069 TMEM120BA0PK00 339 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 A8MXQ7 604 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 ZNF487B1APH4 448 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms