RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 TTLL11Q8NHH1 800 aa6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 CAGE1Q8TC20 777 aa6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 SYTL5Q8TDW5 730 aaPredicted RBP6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 NSMCE1Q8WV22 266 aa6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 DPF2Q92785 391 aa6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 PTP4A1Q93096 173 aa6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 L3MBTL2Q969R5 705 aa6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 EDC3Q96F86 508 aaKnown RBP6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 CLIC6Q96NY7 704 aa6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 NOX5Q96PH1 765 aa6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 EYA3Q99504 573 aa6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 HEPHQ9BQS7 1158 aa6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 TRMT13Q9NUP7 481 aaKnown RBP6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 VPS18Q9P253 973 aa6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 CPNE7Q9UBL6 633 aa6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 USP19O94966 1318 aa6.24□□□□□ -1.41
SPTLC3-205ENST00000476791 CPDO75976 1380 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 A0A0J9YVX5 310 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 USP17L5A8MUK1 530 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 GSG1L2A8MUP6 293 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 H0YIN7 160 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 TRIM77I1YAP6 450 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 J3QW42 95 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 PCDH17O14917 1159 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 HGSO14964 777 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 PRPSAP2O60256 369 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 RASSF9O75901 435 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 PHKG2P15735 406 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 POLR2CP19387 275 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 SYT1P21579 422 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 AFF3P51826 1226 aaKnown RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 RNF4P78317 190 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 IFI35P80217 286 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 ABATP80404 500 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 KRT76Q01546 638 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 ZNF33BQ06732 778 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 CFAP100Q494V2 611 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 MCMDC2Q4G0Z9 681 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 MAP3K21Q5TCX8 1036 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 SYDE2Q5VT97 1194 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 FAM171BQ6P995 826 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 SLC30A10Q6XR72 485 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 SV2AQ7L0J3 742 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 C16orf59Q7L2K0 433 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 PLA2G4DQ86XP0 818 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 PHC2Q8IXK0 858 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 CRYBG2Q8N1P7 616 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 BANPQ8N9N5 519 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 AGBL5Q8NDL9 886 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 ENKURQ8TC29 256 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 SH3RF3Q8TEJ3 882 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 TMEM40Q8WWA1 233 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 NANOS1Q8WY41 292 aaKnown RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 CELF1Q92879 486 aaKnown RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 ABTB1Q969K4 478 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 CNTNAP3BQ96NU0 1288 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 PPP1R16BQ96T49 567 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 CDC6Q99741 560 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 COL25A1Q9BXS0 654 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 CNTNAP3Q9BZ76 1288 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 FHDC1Q9C0D6 1143 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 DMAP1Q9NPF5 467 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 TIMMDC1Q9NPL8 285 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 TBCCD1Q9NVR7 557 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 POLR3BQ9NW08 1133 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 ACTR3BQ9P1U1 418 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 SERTAD1Q9UHV2 236 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 PPT2Q9UMR5 302 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 MAPRE3Q9UPY8 281 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 DNM3Q9UQ16 869 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 USH1CQ9Y6N9 552 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 IGSF1Q8N6C5 1336 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 MTUS2Q5JR59 1369 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 DPPA5A6NC42 116 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 A6NLC8 198 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 IDH3BO43837 385 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 ECE2O60344 883 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 DNAJC8O75937 253 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 RECQL4O94761 1208 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 FSBPO95073 299 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 VEGFAP15692 232 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 ABCB4P21439 1286 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 EEF1GP26641 437 aaKnown RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 GRK6P43250 576 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 IREB2P48200 963 aaKnown RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 METAP1P53582 386 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 EIF3EP60228 445 aaKnown RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 ACTR1AP61163 376 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 XRCC4Q13426 336 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 C1orf141Q5JVX7 400 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 SESTD1Q86VW0 696 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 STX12Q86Y82 276 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 C12orf50Q8NA57 414 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 TANKQ92844 425 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 RILPL2Q969X0 211 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 RAB7BQ96AH8 199 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 CEP170P1Q96L14 293 aa6.23□□□□□ -1.41
SPTLC3-205ENST00000476791 CFAP57Q96MR6 1250 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms