RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 TTC16Q8NEE8 873 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 TCEAL3Q969E4 200 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 CCDC127Q96BQ5 260 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 B3GNT5Q9BYG0 378 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 ZNF518BQ9C0D4 1074 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 ELOVL4Q9GZR5 314 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 MAGEF1Q9HAY2 307 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 MMP17Q9ULZ9 603 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 R3HCC1Q9Y3T6 440 aaKnown RBP13.97□□□□□ -0.17
MRPL55-228ENST00000476267 CPQQ9Y646 472 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 ASPMQ8IZT6 3477 aa13.97□□□□□ -0.17
MRPL55-228ENST00000476267 A0A0A0MRY4 1105 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 BCLAF3A2AJT9 711 aaKnown RBP13.96□□□□□ -0.17
MRPL55-228ENST00000476267 TNFRSF10BO14763 440 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 EIF2DP41214 584 aaKnown RBP13.96□□□□□ -0.17
MRPL55-228ENST00000476267 CYP2J2P51589 502 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 MYL6P60660 151 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 CLDN10P78369 228 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 PSMD2Q13200 908 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 DHCR24Q15392 516 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 N4BP2L1Q5TBK1 243 aaPredicted RBP13.96□□□□□ -0.17
MRPL55-228ENST00000476267 SNX30Q5VWJ9 437 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 IL31Q6EBC2 164 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 TMEM92Q6UXU6 159 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 PAQR9Q6ZVX9 377 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 C12orf40Q86WS4 652 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 NELFCDQ8IXH7 590 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 PHTF2Q8N3S3 785 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 B3GALNT2Q8NCR0 500 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 MDGA1Q8NFP4 955 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 OR6B3Q8NGW1 331 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 CCDC26Q8TAB7 109 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 OLIG1Q8TAK6 271 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 TMEM174Q8WUU8 243 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 CNOT6LQ96LI5 555 aaKnown RBP13.96□□□□□ -0.17
MRPL55-228ENST00000476267 FNBP1Q96RU3 617 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 DUSP9Q99956 384 aaKnown RBP13.96□□□□□ -0.17
MRPL55-228ENST00000476267 LSM14BQ9BX40 385 aaKnown RBP13.96□□□□□ -0.17
MRPL55-228ENST00000476267 SNX25Q9H3E2 840 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 IL37Q9NZH6 218 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 NUP205Q92621 2012 aa13.96□□□□□ -0.17
MRPL55-228ENST00000476267 PVALEFA0A1B0GWK0 134 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 FAM92AA1XBS5 289 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 CLDN5O00501 218 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 RHOBTB1O94844 696 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 BCKDHBP21953 392 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 ATICP31939 592 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 SLC6A11P48066 632 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 CASP4P49662 377 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 DGKEP52429 567 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 SEC13P55735 322 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 TNNC1P63316 161 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 MRPS21P82921 87 aaKnown RBP13.95□□□□□ -0.18
MRPL55-228ENST00000476267 SHC2P98077 582 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 CUL4BQ13620 913 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 ELF2Q15723 593 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 CRY1Q16526 586 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 C2orf27AQ580R0 203 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 TDRD10Q5VZ19 366 aaKnown RBP13.95□□□□□ -0.18
MRPL55-228ENST00000476267 RHBDF2Q6PJF5 856 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 HS2ST1Q7LGA3 356 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 TSTD1Q8NFU3 115 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 OVCA2Q8WZ82 227 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 ZNF396Q96N95 335 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-228ENST00000476267 KCNK16Q96T55 309 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 BACH2Q9BYV9 841 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 TPSD1Q9BZJ3 242 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 BLZF1Q9H2G9 400 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 SMPD4Q9NXE4 827 aa13.95□□□□□ -0.18
MRPL55-228ENST00000476267 CGNQ9P2M7 1197 aaKnown RBP13.95□□□□□ -0.18
MRPL55-228ENST00000476267 LNP1A1A4G5 178 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 A8MXQ7 604 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 SCAMP3O14828 347 aaKnown RBP13.94□□□□□ -0.18
MRPL55-228ENST00000476267 POLR2DO15514 142 aaKnown RBP13.94□□□□□ -0.18
MRPL55-228ENST00000476267 COCHO43405 550 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 KLRC4O43908 158 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 KCNK5O95279 499 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 ZDHHC11BP0C7U3 371 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 KIR2DL1P43626 348 aaPredicted RBP13.94□□□□□ -0.18
MRPL55-228ENST00000476267 CDH8P55286 799 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 KNOP1Q1ED39 458 aaKnown RBP13.94□□□□□ -0.18
MRPL55-228ENST00000476267 RESP18Q5W5W9 173 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 FAM35AQ86V20 835 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 NUP93Q8N1F7 819 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 IL17RCQ8NAC3 791 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 PARD3BQ8TEW8 1205 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 SYAP1Q96A49 352 aaPredicted RBP13.94□□□□□ -0.18
MRPL55-228ENST00000476267 SLITRK1Q96PX8 696 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 SDCBP2Q9H190 292 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 SMYD3Q9H7B4 428 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 SLC39A2Q9NP94 309 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 DMAC2Q9NW81 257 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 CFAP97Q9P2B7 532 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 NXF1Q9UBU9 619 aaKnown RBP13.94□□□□□ -0.18
MRPL55-228ENST00000476267 INVSQ9Y283 1065 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 FRYQ5TBA9 3013 aa13.94□□□□□ -0.18
MRPL55-228ENST00000476267 E2F8A0AVK6 867 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 LRRIQ3A6PVS8 624 aaPredicted RBP13.93□□□□□ -0.18
MRPL55-228ENST00000476267 SLC9A3R1O14745 358 aaPredicted RBP13.93□□□□□ -0.18
MRPL55-228ENST00000476267 ADAM23O75077 832 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms