RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 UBXN6Q9BZV1 441 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 ZCWPW1Q9H0M4 648 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 DMAP1Q9NPF5 467 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-210ENST00000475329 TMLHEQ9NVH6 421 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 DDX56Q9NY93 547 aaKnown RBP14.42□□□□□ -0.1
TRAF4-210ENST00000475329 PRKAG2Q9UGJ0 569 aa14.42□□□□□ -0.1
TRAF4-210ENST00000475329 GOLGA6L10A0A0M3HER8 536 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 OR6C75A6NL08 312 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 CCDC188H7C350 402 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 H7C4K7 107 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 KRIT1O00522 736 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 GRAP2O75791 330 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 KRT1P04264 644 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 PYGMP11217 842 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 PDGFRAP16234 1089 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 BDNFP23560 247 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 FLT3P36888 993 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 CETN2P41208 172 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 ALDH7A1P49419 539 aaKnown RBP14.41□□□□□ -0.1
TRAF4-210ENST00000475329 DEFB103AP81534 67 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 PPIGQ13427 754 aaKnown RBP eCLIP14.41□□□□□ -0.16e-10■■□□□ 12.8
TRAF4-210ENST00000475329 CTXN3Q4LDR2 81 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 EFHC1Q5JVL4 640 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 POLNQ7Z5Q5 900 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 LRRTM3Q86VH5 581 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 CEP57Q86XR8 500 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 CMTR2Q8IYT2 770 aaKnown RBP14.41□□□□□ -0.1
TRAF4-210ENST00000475329 EXD1Q8NHP7 514 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 CLEC4CQ8WTT0 213 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 RBM41Q96IZ5 413 aaKnown RBP14.41□□□□□ -0.1
TRAF4-210ENST00000475329 NCAPGQ9BPX3 1015 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 RHOBTB2Q9BYZ6 727 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 GPR62Q9BZJ7 368 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 CWH43Q9H720 699 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 CSNK1G1Q9HCP0 422 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 GREB1Q4ZG55 1949 aa14.41□□□□□ -0.1
TRAF4-210ENST00000475329 ZNF638Q14966 1978 aaKnown RBP14.4□□□□□ -0.1
TRAF4-210ENST00000475329 CARNS1A5YM72 827 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 NT5C1B-RDH14C9J2C7 533 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 SART1O43290 800 aaKnown RBP14.4□□□□□ -0.1
TRAF4-210ENST00000475329 HSF2BPO75031 334 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 LRCH4O75427 683 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 DAB1O75553 588 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 KRT7P08729 469 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 RHOXF2BP0C7M4 288 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 ACRP10323 421 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 TCF4P15884 667 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 SDC4P31431 198 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 PBX3P40426 434 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 PTPN9P43378 593 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 TKTL1P51854 596 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 CACNA2D1P54289 1103 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 MRPS5P82675 430 aaKnown RBP14.4□□□□□ -0.1
TRAF4-210ENST00000475329 SLC25A11Q02978 314 aaKnown RBP14.4□□□□□ -0.1
TRAF4-210ENST00000475329 ADCY1Q08828 1119 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 MRPL58Q14197 206 aaKnown RBP14.4□□□□□ -0.1
TRAF4-210ENST00000475329 NFE2Q16621 373 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-210ENST00000475329 SLC39A12Q504Y0 691 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 RAB41Q5JT25 222 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 SPOUT1Q5T280 376 aaKnown RBP14.4□□□□□ -0.1
TRAF4-210ENST00000475329 ZFYVE27Q5T4F4 411 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 TRNP1Q6NT89 227 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 AADACL2Q6P093 401 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 SLC13A5Q86YT5 568 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-210ENST00000475329 CCDC50Q8IVM0 306 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 ZMIZ2Q8NF64 920 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 MAIP1Q8WWC4 291 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 ANKRD7Q92527 254 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 KHSRPQ92945 711 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRAF4-210ENST00000475329 ZNF689Q96CS4 500 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-210ENST00000475329 RHOXF2Q9BQY4 288 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 AP1M1Q9BXS5 423 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 OXCT2Q9BYC2 517 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-210ENST00000475329 RC3H2Q9HBD1 1191 aaKnown RBP14.4□□□□□ -0.1
TRAF4-210ENST00000475329 PNPLA8Q9NP80 782 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 TMEM30AQ9NV96 361 aa14.4□□□□□ -0.1
TRAF4-210ENST00000475329 COL4A4P53420 1690 aaPredicted RBP14.39□□□□□ -0.11
TRAF4-210ENST00000475329 TARSL2A2RTX5 802 aaKnown RBP14.39□□□□□ -0.11
TRAF4-210ENST00000475329 HHLA1C9JL84 531 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 ZRANB2O95218 330 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRAF4-210ENST00000475329 GLI1P08151 1106 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 OR4Q2P0C623 313 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 PCK1P35558 622 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 CDR1P51861 262 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 SMC1AQ14683 1233 aaKnown RBP14.39□□□□□ -0.11
TRAF4-210ENST00000475329 TAF5Q15542 800 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 PPP2R5EQ16537 467 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 CCDC14Q49A88 953 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 ODF2Q5BJF6 829 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 C8orf74Q6P047 294 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 ANKS3Q6ZW76 656 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 TMEM173Q86WV6 379 aaPredicted RBP14.39□□□□□ -0.11
TRAF4-210ENST00000475329 RCOR2Q8IZ40 523 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 BCL7CQ8WUZ0 217 aaPredicted RBP14.39□□□□□ -0.11
TRAF4-210ENST00000475329 FAM149B1Q96BN6 582 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 FUBP3Q96I24 572 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRAF4-210ENST00000475329 ZNF558Q96NG5 402 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 KCNK16Q96T55 309 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 KRT12Q99456 494 aa14.39□□□□□ -0.11
TRAF4-210ENST00000475329 TTPALQ9BTX7 342 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms