RNA–Protein interactions for RNA: ENST00000475318.1

POLR1B-212, Transcript of RNA polymerase I subunit B, humanhuman

TSL 3

Gene POLR1B, Length 680 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-212ENST00000475318 PRR25Q96S07 402 aa4.11□□□□□ -1.75
POLR1B-212ENST00000475318 SMAD5Q99717 465 aaKnown RBP4.11□□□□□ -1.75
POLR1B-212ENST00000475318 CXorf36Q9H7Y0 433 aa4.11□□□□□ -1.75
POLR1B-212ENST00000475318 TRMT13Q9NUP7 481 aaKnown RBP4.11□□□□□ -1.75
POLR1B-212ENST00000475318 XPR1Q9UBH6 696 aa4.11□□□□□ -1.75
POLR1B-212ENST00000475318 HEY2Q9UBP5 337 aa4.11□□□□□ -1.75
POLR1B-212ENST00000475318 AMFRQ9UKV5 643 aa4.11□□□□□ -1.75
POLR1B-212ENST00000475318 B4DGG1 531 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 CES2O00748 559 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 SMAD6O43541 496 aaKnown RBP4.1□□□□□ -1.75
POLR1B-212ENST00000475318 RECQLP46063 649 aaPredicted RBP4.1□□□□□ -1.75
POLR1B-212ENST00000475318 ME1P48163 572 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 MAP2K6P52564 334 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 KRT17Q04695 432 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 AWAT1Q58HT5 328 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 TMEM240Q5SV17 173 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 LVRNQ6Q4G3 990 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 COLCA1Q6ZS62 124 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 USP45Q70EL2 814 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 PIP4P1Q86T03 277 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 ZNF280BQ86YH2 543 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 ANKRD13BQ86YJ7 626 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 SFTPA1Q8IWL2 248 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 IZUMO1Q8IYV9 350 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 ABRAQ8N0Z2 381 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.1□□□□□ -1.75
POLR1B-212ENST00000475318 ZNF398Q8TD17 642 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 FAM234AQ9H0X4 552 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 PCDH12Q9NPG4 1184 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 SPEF1Q9Y4P9 236 aa4.1□□□□□ -1.75
POLR1B-212ENST00000475318 PRSS44E7EML9 344 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 GTPBP1O00178 669 aaKnown RBP4.09□□□□□ -1.75
POLR1B-212ENST00000475318 TLR2O60603 784 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 FGAP02671 866 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 POU2F2P09086 479 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 T-ENOLP0DO92 83 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 CCND1P24385 295 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 CDKN2AP42771 156 aaKnown RBP4.09□□□□□ -1.75
POLR1B-212ENST00000475318 PSG6Q00889 435 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 PLS1Q14651 629 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 EMC10Q5UCC4 262 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 CATIPQ7Z7H3 387 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.09□□□□□ -1.75
POLR1B-212ENST00000475318 KRT78Q8N1N4 520 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 PNISRQ8TF01 805 aaKnown RBP4.09□□□□□ -1.75
POLR1B-212ENST00000475318 CTAGE1Q96RT6 745 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 PCDHA6Q9UN73 950 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 TMX2Q9Y320 296 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 COL4A3BPQ9Y5P4 624 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 SNX14Q9Y5W7 946 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 HS3ST3B1Q9Y662 390 aa4.09□□□□□ -1.75
POLR1B-212ENST00000475318 PSMD9O00233 223 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 TOMM40O96008 361 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 MT-CO3P00414 261 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 COPB1P53618 953 aaKnown RBP4.08□□□□□ -1.76
POLR1B-212ENST00000475318 UCP3P55916 312 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 SUMO2P61956 95 aaKnown RBP4.08□□□□□ -1.76
POLR1B-212ENST00000475318 SRSF1Q07955 248 aaKnown RBP eCLIP4.08□□□□□ -1.76
POLR1B-212ENST00000475318 MLC1Q15049 377 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 KRTAP27-1Q3LI81 207 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 C4orf46Q504U0 113 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 KHDC1LQ5JSQ8 128 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 UBAP2Q5T6F2 1119 aaKnown RBP4.08□□□□□ -1.76
POLR1B-212ENST00000475318 DAB2IPQ5VWQ8 1189 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 ANO7Q6IWH7 933 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 ZNF549Q6P9A3 640 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 TMEM65Q6PI78 240 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 Q6ZTC4 211 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 ARFGAP1Q8N6T3 406 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 ZBTB8BQ8NAP8 495 aaPredicted RBP4.08□□□□□ -1.76
POLR1B-212ENST00000475318 SLC35A4Q96G79 324 aa4.08□□□□□ -1.76
POLR1B-212ENST00000475318 GTPBP4Q9BZE4 634 aaKnown RBP4.08□□□□□ -1.76
POLR1B-212ENST00000475318 SARS2Q9NP81 518 aaKnown RBP4.08□□□□□ -1.76
POLR1B-212ENST00000475318 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.08□□□□□ -1.76
POLR1B-212ENST00000475318 MYO1CO00159 1063 aa4.07□□□□□ -1.76
POLR1B-212ENST00000475318 TULP3O75386 442 aa4.07□□□□□ -1.76
POLR1B-212ENST00000475318 SNUPNO95149 360 aaKnown RBP4.07□□□□□ -1.76
POLR1B-212ENST00000475318 CYP2C9P11712 490 aa4.07□□□□□ -1.76
POLR1B-212ENST00000475318 PHKG2P15735 406 aa4.07□□□□□ -1.76
POLR1B-212ENST00000475318 PRKAG1P54619 331 aa4.07□□□□□ -1.76
POLR1B-212ENST00000475318 NKX6-1P78426 367 aaPredicted RBP4.07□□□□□ -1.76
POLR1B-212ENST00000475318 HYAL1Q12794 435 aa4.07□□□□□ -1.76
POLR1B-212ENST00000475318 ZIK1Q3SY52 487 aaPredicted RBP4.07□□□□□ -1.76
POLR1B-212ENST00000475318 MGAT5BQ3V5L5 792 aa4.07□□□□□ -1.76
POLR1B-212ENST00000475318 BRDTQ58F21 947 aaPredicted RBP4.07□□□□□ -1.76
POLR1B-212ENST00000475318 TMTC4Q5T4D3 741 aa4.07□□□□□ -1.76
POLR1B-212ENST00000475318 DEF8Q6ZN54 512 aa4.07□□□□□ -1.76
POLR1B-212ENST00000475318 TMEM171Q8WVE6 324 aa4.07□□□□□ -1.76
POLR1B-212ENST00000475318 TRMOQ9BU70 441 aa4.07□□□□□ -1.76
POLR1B-212ENST00000475318 LPAR3Q9UBY5 353 aa4.07□□□□□ -1.76
POLR1B-212ENST00000475318 PMPCBO75439 489 aa4.06□□□□□ -1.76
POLR1B-212ENST00000475318 CTSAP10619 480 aa4.06□□□□□ -1.76
POLR1B-212ENST00000475318 GKP32189 559 aa4.06□□□□□ -1.76
POLR1B-212ENST00000475318 DGKEP52429 567 aa4.06□□□□□ -1.76
POLR1B-212ENST00000475318 RPS13P62277 151 aaKnown RBP4.06□□□□□ -1.76
POLR1B-212ENST00000475318 RHDQ02161 417 aa4.06□□□□□ -1.76
POLR1B-212ENST00000475318 LMAN2Q12907 356 aa4.06□□□□□ -1.76
POLR1B-212ENST00000475318 SEC23BQ15437 767 aa4.06□□□□□ -1.76
POLR1B-212ENST00000475318 PGS1Q32NB8 556 aa4.06□□□□□ -1.76
POLR1B-212ENST00000475318 LIX1LQ8IVB5 337 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms