RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 TTLL2Q9BWV7 592 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 ARHGEF4Q9NR80 690 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 STK17AQ9UEE5 414 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 CCDC39Q9UFE4 941 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 PILRBQ9UKJ0 227 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 SLC6A14Q9UN76 642 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 PCDHB13Q9Y5F0 798 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 BAHCC1Q9P281 2608 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 ZNF840PA6NDX5 716 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 SGK1O00141 431 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 KIAA0391O15091 583 aaKnown RBP13.45□□□□□ -0.26
SKA3-206ENST00000475251 ZBTB24O43167 697 aaPredicted RBP13.45□□□□□ -0.26
SKA3-206ENST00000475251 OPHN1O60890 802 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 OLFM2O95897 454 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 PTGER3P43115 390 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 NOP14P78316 857 aaKnown RBP13.45□□□□□ -0.26
SKA3-206ENST00000475251 CYP27A1Q02318 531 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 RING1Q06587 406 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 SURF1Q15526 300 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 ZNF423Q2M1K9 1284 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 SOWAHAQ2M3V2 549 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 GAB4Q2WGN9 574 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 PIP4P1Q86T03 277 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 HMGB4Q8WW32 186 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 OTUB2Q96DC9 234 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 SAAL1Q96ER3 474 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 SLITRK1Q96PX8 696 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 STRA6Q9BX79 667 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 MTMR12Q9C0I1 747 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 TMEM74BQ9NUR3 256 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 CPQQ9Y646 472 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 PLXND1Q9Y4D7 1925 aa13.45□□□□□ -0.26
SKA3-206ENST00000475251 ASPMQ8IZT6 3477 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 TNRC6BQ9UPQ9 1833 aaKnown RBP13.44□□□□□ -0.26
SKA3-206ENST00000475251 ATRXP46100 2492 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 SPAARA0A1B0GVQ0 90 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 TCRBV21S2A2A0A5A6 115 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 GCNT3O95395 438 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 SEC24BO95487 1268 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 ABL1P00519 1130 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 TNNC2P02585 160 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 SYPP08247 313 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 SERPINF2P08697 491 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 ADH5P11766 374 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 HOXB3P14651 431 aaPredicted RBP13.44□□□□□ -0.26
SKA3-206ENST00000475251 BDNFP23560 247 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 KIR2DL1P43626 348 aaPredicted RBP13.44□□□□□ -0.26
SKA3-206ENST00000475251 ZXDBP98169 803 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 RPL6Q02878 288 aaKnown RBP13.44□□□□□ -0.26
SKA3-206ENST00000475251 GAD2Q05329 585 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 MAP7D1Q3KQU3 841 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 TDRD10Q5VZ19 366 aaKnown RBP13.44□□□□□ -0.26
SKA3-206ENST00000475251 BTBD8Q5XKL5 378 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 DYMQ7RTS9 669 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 PDZD8Q8NEN9 1154 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 CXorf38Q8TB03 319 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 MYCBPAPQ8TBZ2 947 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 C8orf48Q96LL4 319 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 GTPBP2Q9BX10 602 aaKnown RBP13.44□□□□□ -0.26
SKA3-206ENST00000475251 OLFML3Q9NRN5 406 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 KLK13Q9UKR3 277 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 PTPRDP23468 1912 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 SPEGQ15772 3267 aa13.44□□□□□ -0.26
SKA3-206ENST00000475251 ATXN2Q99700 1313 aaKnown RBP13.43□□□□□ -0.26
SKA3-206ENST00000475251 FAM221BA6H8Z2 402 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 ZNF217O75362 1048 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 OAS1P00973 400 aaKnown RBP13.43□□□□□ -0.26
SKA3-206ENST00000475251 MBL2P11226 248 aaPredicted RBP13.43□□□□□ -0.26
SKA3-206ENST00000475251 HNRNPLP14866 589 aaKnown RBP eCLIP13.43□□□□□ -0.26
SKA3-206ENST00000475251 ITPKAP23677 461 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 GJB2P29033 226 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 TXLNAP40222 546 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 WNT7BP56706 349 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 PSMC1P62191 440 aaKnown RBP13.43□□□□□ -0.26
SKA3-206ENST00000475251 CCDC142Q17RM4 750 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 BRAPQ7Z569 592 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 GPD1LQ8N335 351 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 NOC3LQ8WTT2 800 aaKnown RBP13.43□□□□□ -0.26
SKA3-206ENST00000475251 HPDLQ96IR7 371 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 RNF38Q9H0F5 515 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 IKZF4Q9H2S9 585 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 SMPD4Q9NXE4 827 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 CFAP97Q9P2B7 532 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 MBD1Q9UIS9 605 aaPredicted RBP13.43□□□□□ -0.26
SKA3-206ENST00000475251 SIX4Q9UIU6 781 aa13.43□□□□□ -0.26
SKA3-206ENST00000475251 ZZEF1O43149 2961 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 E2F8A0AVK6 867 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 TBC1D3BA6NDS4 549 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 ATMINO43313 823 aaPredicted RBP13.42□□□□□ -0.26
SKA3-206ENST00000475251 HCRTO43612 131 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 ATP2C2O75185 946 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 WARSP23381 471 aaKnown RBP13.42□□□□□ -0.26
SKA3-206ENST00000475251 LMO2P25791 158 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 SLC6A11P48066 632 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 USP46P62068 366 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 KDSRQ06136 332 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 ZNF33AQ06730 810 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 KCNA1Q09470 495 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 SLC14A1Q13336 389 aa13.42□□□□□ -0.26
SKA3-206ENST00000475251 DUOXA2Q1HG44 320 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms