RNA–Protein interactions for RNA: ENST00000474557.1

HMGN1P10-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 10, humanhuman

BASIC

Gene HMGN1P10, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P10-201ENST00000474557 SATB1Q01826 763 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 POU3F1Q03052 451 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 TLE1Q04724 770 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 LARS2Q15031 903 aaKnown RBP3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 C21orf62-AS1Q17RA5 79 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 WASHC2DQ5SRD0 308 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 CC2D1BQ5T0F9 858 aaKnown RBP3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 PPP4R3AQ6IN85 833 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 RTL10Q7L3V2 364 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 NIM1KQ8IY84 436 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 LEO1Q8WVC0 666 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 ZNF556Q9HAH1 456 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 MRPS18AQ9NVS2 196 aaKnown RBP3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 TMEM45AQ9NWC5 275 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 KCNG2Q9UJ96 466 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 PCDHA13Q9Y5I0 950 aa3.22□□□□□ -1.89
HMGN1P10-201ENST00000474557 SCN5AQ14524 2016 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 F2RL2O00254 374 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 DDNO94850 711 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 BPIP17213 487 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 HOXC13P31276 330 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 KRT2P35908 639 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 MTNR1BP49286 362 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 COPB1P53618 953 aaKnown RBP3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 ERVFC1-1P60608 527 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 SUMO2P61956 95 aaKnown RBP3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 BOP1Q14137 746 aaKnown RBP3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 PTGR1Q14914 329 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 NFE2L2Q16236 605 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 FAM160B1Q5W0V3 765 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 RGS7BPQ6MZT1 257 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 TRAPPC11Q7Z392 1133 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 PPP1R32Q7Z5V6 425 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 MFSD3Q96ES6 412 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 CLPTM1LQ96KA5 538 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 HS6ST2Q96MM7 605 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 INPP4AQ96PE3 977 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 TTC1Q99614 292 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 SEZ6LQ9BYH1 1024 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 CDT1Q9H211 546 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 HIF1ANQ9NWT6 349 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 LIMCH1Q9UPQ0 1083 aa3.21□□□□□ -1.9
HMGN1P10-201ENST00000474557 TMEM272A0A1B0GTI8 110 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 EPN2O95208 641 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 SMARCA1P28370 1054 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 TACR3P29371 465 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 ART1P52961 327 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 FAPQ12884 760 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 NAALADL2Q58DX5 795 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 AWAT1Q58HT5 328 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 ADAM5Q6NVV9 412 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 DCDC5Q6ZRR9 648 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 SRGAP1Q7Z6B7 1085 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 USP37Q86T82 979 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 CMIPQ8IY22 773 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 SLC46A1Q96NT5 459 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 SLAMF7Q9NQ25 335 aa3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 APOBEC2Q9Y235 224 aaKnown RBP3.2□□□□□ -1.9
HMGN1P10-201ENST00000474557 M0QYG6 137 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 PSMD9O00233 223 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 CES2O00748 559 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 ERC2O15083 957 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 USP12O75317 370 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 HOXB2P14652 356 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 PDE6CP51160 858 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 DHCR24Q15392 516 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 SEC23BQ15437 767 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 LONRF3Q496Y0 759 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 SH2D6Q7Z4S9 175 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 CAND1Q86VP6 1230 aaKnown RBP3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 DHX37Q8IY37 1157 aaKnown RBP3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 OSCP1Q8WVF1 389 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 OIT3Q8WWZ8 545 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 MRGPRX4Q96LA9 322 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 TTYH3Q9C0H2 523 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 COG5Q9UP83 839 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 AGAP1Q9UPQ3 857 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 GPR45Q9Y5Y3 372 aa3.19□□□□□ -1.9
HMGN1P10-201ENST00000474557 BTBD18B2RXH4 712 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 YPEL5P62699 121 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 POU5F1BQ06416 359 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 KCNB1Q14721 858 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 KIF22Q14807 665 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 IQCB1Q15051 598 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 CCDC6Q16204 474 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 CYP1B1Q16678 543 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 SLC4A8Q2Y0W8 1093 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 SPSB3Q6PJ21 355 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 CTCFLQ8NI51 663 aaPredicted RBP3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 PMFBP1Q8TBY8 1022 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 MOGAT1Q96PD6 335 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 FZD3Q9NPG1 666 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 CCM2LQ9NUG4 571 aaPredicted RBP3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 ANAPC4Q9UJX5 808 aa3.18□□□□□ -1.9
HMGN1P10-201ENST00000474557 IGKV3D-20A0A0C4DH25 116 aa3.17□□□□□ -1.9
HMGN1P10-201ENST00000474557 A0A1B0GUV1 79 aa3.17□□□□□ -1.9
HMGN1P10-201ENST00000474557 SRRM3A6NNA2 597 aaPredicted RBP3.17□□□□□ -1.9
HMGN1P10-201ENST00000474557 HOXA11P31270 313 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms