RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 SGO2Q562F6 1265 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 MDH1BQ5I0G3 518 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 ARHGAP17Q68EM7 881 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 ZNF280DQ6N043 979 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 CYP26C1Q6V0L0 522 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 DNAJC14Q6Y2X3 702 aaPredicted RBP8.04□□□□□ -1.12
CCDC93-207ENST00000474006 PAQR9Q6ZVX9 377 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 ZNF677Q86XU0 584 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 TMTC1Q8IUR5 882 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 ZNF295-AS1Q8N0V1 137 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 MEIOBQ8N635 442 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 UBA3Q8TBC4 463 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 PCED1BQ96HM7 432 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 PCDHB18PQ96TA0 734 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 PKMYT1Q99640 499 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 HNRNPABQ99729 332 aaKnown RBP8.04□□□□□ -1.12
CCDC93-207ENST00000474006 BAG1Q99933 345 aaPredicted RBP8.04□□□□□ -1.12
CCDC93-207ENST00000474006 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.04□□□□□ -1.12
CCDC93-207ENST00000474006 ZNF576Q9H609 170 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 NHEJ1Q9H9Q4 299 aaPredicted RBP8.04□□□□□ -1.12
CCDC93-207ENST00000474006 RXFP1Q9HBX9 757 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 NGRNQ9NPE2 291 aaKnown RBP8.04□□□□□ -1.12
CCDC93-207ENST00000474006 ENTPD7Q9NQZ7 604 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 TLR9Q9NR96 1032 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.04□□□□□ -1.12
CCDC93-207ENST00000474006 FAM49BQ9NUQ9 324 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 FNIP2Q9P278 1114 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 ARHGAP20Q9P2F6 1191 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 ADAMTS1Q9UHI8 967 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 NOCTQ9UK39 431 aaKnown RBP8.04□□□□□ -1.12
CCDC93-207ENST00000474006 CDY1Q9Y6F8 540 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 TNRC18O15417 2968 aaPredicted RBP8.04□□□□□ -1.12
CCDC93-207ENST00000474006 C2orf71A6NGG8 1288 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 HIDE1A8MVS5 230 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 O00370 1275 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 CLDN5O00501 218 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 FSCN2O14926 492 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 TEX28O15482 410 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 MED7O43513 233 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 MICAL2O94851 1124 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 ABLIM3O94929 683 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 CSPG5O95196 566 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 CNPP09543 421 aaKnown RBP8.03□□□□□ -1.12
CCDC93-207ENST00000474006 ADORA2BP29275 332 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 IRS1P35568 1242 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 FMO1Q01740 532 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 CYP27A1Q02318 531 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 SMARCB1Q12824 385 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 RAB33AQ14088 237 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 SMC1AQ14683 1233 aaKnown RBP8.03□□□□□ -1.12
CCDC93-207ENST00000474006 STILQ15468 1287 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 TEAD4Q15561 434 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 MAPRE1Q15691 268 aaKnown RBP8.03□□□□□ -1.12
CCDC93-207ENST00000474006 NFE2Q16621 373 aaPredicted RBP8.03□□□□□ -1.12
CCDC93-207ENST00000474006 PLPP4Q5VZY2 271 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 SLC8B1Q6J4K2 584 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 DENND1BQ6P3S1 775 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 LCLAT1Q6UWP7 414 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 PALB2Q86YC2 1186 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 TMEM139Q8IV31 216 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 FUKQ8N0W3 1084 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 WDTC1Q8N5D0 677 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 ANKRD52Q8NB46 1076 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 ATAD1Q8NBU5 361 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 SLC30A5Q8TAD4 765 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 ZNF461Q8TAF7 563 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 SLC2A14Q8TDB8 520 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 CCDC42Q96M95 316 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 KLHL5Q96PQ7 755 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 SYT11Q9BT88 431 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 MED10Q9BTT4 135 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 LHX5Q9H2C1 402 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 PDCL3Q9H2J4 239 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 TSPAN16Q9UKR8 245 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 PCDHGC5Q9Y5F6 944 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 IRAK3Q9Y616 596 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 USP3Q9Y6I4 520 aa8.03□□□□□ -1.12
CCDC93-207ENST00000474006 RANBP2P49792 3224 aaKnown RBP8.03□□□□□ -1.12
CCDC93-207ENST00000474006 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.02□□□□□ -1.13
CCDC93-207ENST00000474006 SSU72P8A0A1W2PR75 194 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 WDR27A2RRH5 827 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 DDX3XO00571 662 aaKnown RBP eCLIP8.02□□□□□ -1.13
CCDC93-207ENST00000474006 AKR1B10O60218 316 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 LPXNO60711 386 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 BEST1O76090 585 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 VNN2O95498 520 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 SPATA31D3P0C874 917 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 CPB1P15086 417 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 BDNFP23560 247 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 CYP2F1P24903 491 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 KLRC2P26717 231 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 GPC1P35052 558 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 ROR1Q01973 937 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 CREMQ03060 361 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 DUSP4Q13115 394 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 GOLGA7BQ2TAP0 167 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 TDRD12Q587J7 1177 aaKnown RBP8.02□□□□□ -1.13
CCDC93-207ENST00000474006 TBCELQ5QJ74 424 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 TPGS2Q68CL5 300 aa8.02□□□□□ -1.13
CCDC93-207ENST00000474006 PDE12Q6L8Q7 609 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms