RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 CACNA1EQ15878 2313 aa10.29□□□□□ -0.76
MCF2L-223ENST00000473345 ATRXP46100 2492 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 A0A1W2PQF6 199 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 F8VP50 259 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 CLDN5O00501 218 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 GREM1O60565 184 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 HUS1O60921 280 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 PRPF6O94906 941 aaKnown RBP10.28□□□□□ -0.76
MCF2L-223ENST00000473345 KAT7O95251 611 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 NFATC1O95644 943 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 CST3P01034 146 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-223ENST00000473345 KRT19P08727 400 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 GABRG2P18507 467 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 WASP42768 502 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 SIM1P81133 766 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-223ENST00000473345 AMPD2Q01433 879 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 TAF10Q12962 218 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 KCNB1Q14721 858 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 LY6G5CQ5SRR4 150 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 SLC23A3Q6PIS1 610 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 NT5DC4Q86YG4 428 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 CBWD2Q8IUF1 395 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 SYT12Q8IV01 421 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 ETFBKMTQ8IXQ9 262 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 TMEM86AQ8N2M4 240 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 TOP6BLQ8N6T0 577 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 NAT16Q8N8M0 369 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 CALML4Q96GE6 196 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 FUBP3Q96I24 572 aaKnown RBP eCLIP10.28□□□□□ -0.76
MCF2L-223ENST00000473345 SPATA17Q96L03 361 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 ZNF518BQ9C0D4 1074 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 CAPN10Q9HC96 672 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 INTS13Q9NVM9 706 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 UXTQ9UBK9 157 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-223ENST00000473345 FBXO2Q9UK22 296 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-223ENST00000473345 LHX6Q9UPM6 363 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 MSRB2Q9Y3D2 182 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 NEUROG3Q9Y4Z2 214 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 ADAMTS9Q9P2N4 1935 aa10.28□□□□□ -0.76
MCF2L-223ENST00000473345 TCRBV21S2A2A0A5A6 115 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 FRMD3A2A2Y4 597 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 TNFRSF10BO14763 440 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 COCHO43405 550 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 SLC26A4O43511 780 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 GJB3O75712 270 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 PNPLA4P41247 253 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 MRPS21P82921 87 aaKnown RBP10.27□□□□□ -0.77
MCF2L-223ENST00000473345 MYL7Q01449 175 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 MDH1BQ5I0G3 518 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 C19orf48Q6RUI8 117 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 PAQR9Q6ZVX9 377 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 LPCAT2Q7L5N7 544 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 MARCH9Q86YJ5 346 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 ZNF516Q92618 1163 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 BBC3Q96PG8 261 aaPredicted RBP10.27□□□□□ -0.77
MCF2L-223ENST00000473345 PNKPQ96T60 521 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 B3GNT5Q9BYG0 378 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 MRPL44Q9H9J2 332 aaKnown RBP10.27□□□□□ -0.77
MCF2L-223ENST00000473345 MAGEC2Q9UBF1 373 aaPredicted RBP10.27□□□□□ -0.77
MCF2L-223ENST00000473345 ITGA11Q9UKX5 1188 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.77
MCF2L-223ENST00000473345 MYOFQ9NZM1 2061 aa10.27□□□□□ -0.77
MCF2L-223ENST00000473345 FREM2Q5SZK8 3169 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 IGHV1OR15-9A0A0B4J2B8 117 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 FAM221BA6H8Z2 402 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 TMEM8BA6NDV4 472 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 GCNT3O95395 438 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 GARTP22102 1010 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 SCP2P22307 547 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 WARSP23381 471 aaKnown RBP10.26□□□□□ -0.77
MCF2L-223ENST00000473345 LONP1P36776 959 aaKnown RBP10.26□□□□□ -0.77
MCF2L-223ENST00000473345 GRIK1P39086 918 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 LHX1P48742 406 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 NOP14P78316 857 aaKnown RBP10.26□□□□□ -0.77
MCF2L-223ENST00000473345 RBP5P82980 135 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 CYP27A1Q02318 531 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 RESTQ13127 1097 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 SOWAHCQ53LP3 525 aaPredicted RBP10.26□□□□□ -0.77
MCF2L-223ENST00000473345 LYSMD4Q5XG99 296 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 EGFLAMQ63HQ2 1017 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 DENND5BQ6ZUT9 1274 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 TOGARAM2Q6ZUX3 1019 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 RAB44Q7Z6P3 723 aaPredicted RBP10.26□□□□□ -0.77
MCF2L-223ENST00000473345 TMEM25Q86YD3 366 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 BBS7Q8IWZ6 715 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 PNPLA1Q8N8W4 532 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 SCAMP5Q8TAC9 235 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 MYCBPAPQ8TBZ2 947 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 SPATA18Q8TC71 538 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 PLEKHO2Q8TD55 490 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 NOC3LQ8WTT2 800 aaKnown RBP10.26□□□□□ -0.77
MCF2L-223ENST00000473345 HVCN1Q96D96 273 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 HPDLQ96IR7 371 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 KCNK16Q96T55 309 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 PANK2Q9BZ23 570 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 CCSER2Q9H7U1 834 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 ARHGEF4Q9NR80 690 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 TRPM5Q9NZQ8 1165 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 CALCOCO1Q9P1Z2 691 aa10.26□□□□□ -0.77
MCF2L-223ENST00000473345 CDH9Q9ULB4 789 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms