RNA–Protein interactions for RNA: ENST00000473195.5

TRAIP-203, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-203ENST00000473195 SDK1Q7Z5N4 2213 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 LEFTY2O00292 366 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 TRDMT1O14717 391 aaKnown RBP12.88□□□□□ -0.35
TRAIP-203ENST00000473195 STAU1O95793 577 aaKnown RBP12.88□□□□□ -0.35
TRAIP-203ENST00000473195 TGM1P22735 817 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 ATICP31939 592 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 GRSF1Q12849 480 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRAIP-203ENST00000473195 TAF10Q12962 218 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 PSMD2Q13200 908 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 SIM2Q14190 667 aaPredicted RBP12.88□□□□□ -0.35
TRAIP-203ENST00000473195 PDGFRLQ15198 375 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 ZNF667Q5HYK9 610 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 C1orf220Q5T0J3 134 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 PAQR9Q6ZVX9 377 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 ACOT1Q86TX2 421 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 FAM35AQ86V20 835 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 LONP2Q86WA8 852 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 CPA6Q8N4T0 437 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 C8orf48Q96LL4 319 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 TTLL2Q9BWV7 592 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 MMRN2Q9H8L6 949 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 TRPM5Q9NZQ8 1165 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 CPQQ9Y646 472 aa12.88□□□□□ -0.35
TRAIP-203ENST00000473195 MYO18AQ92614 2054 aaKnown RBP12.88□□□□□ -0.35
TRAIP-203ENST00000473195 MED19A0JLT2 244 aaPredicted RBP12.87□□□□□ -0.35
TRAIP-203ENST00000473195 ZNF840PA6NDX5 716 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 SOBPA7XYQ1 873 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 BEST1O76090 585 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 PAPSS2O95340 614 aaPredicted RBP12.87□□□□□ -0.35
TRAIP-203ENST00000473195 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 CCDC130P13994 396 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 NOP14P78316 857 aaKnown RBP12.87□□□□□ -0.35
TRAIP-203ENST00000473195 CLDN10P78369 228 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 DPYDQ12882 1025 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 RPLP0P6Q8NHW5 317 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 SCAMP5Q8TAC9 235 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 GOLGA5Q8TBA6 731 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 CD101Q93033 1021 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 COL26A1Q96A83 441 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 HHIPQ96QV1 700 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 P2RY13Q9BPV8 354 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 ELOVL4Q9GZR5 314 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 GMEB2Q9UKD1 530 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 RAB23Q9ULC3 237 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 ARHGAP26Q9UNA1 814 aa12.87□□□□□ -0.35
TRAIP-203ENST00000473195 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.87□□□□□ -0.35
TRAIP-203ENST00000473195 PDXKO00764 312 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 HLA-DRAP01903 254 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 MBL2P11226 248 aaPredicted RBP12.86□□□□□ -0.35
TRAIP-203ENST00000473195 PIK3CAP42336 1068 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 PGFP49763 221 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 NDST1P52848 882 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 SEC13P55735 322 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 CCDC6Q16204 474 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 GAB4Q2WGN9 574 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 ZACNQ401N2 412 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 LAIR1Q6GTX8 287 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 SV2AQ7L0J3 742 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 DGLUCYQ7Z3D6 616 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.86□□□□□ -0.35
TRAIP-203ENST00000473195 FILIP1Q7Z7B0 1213 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 WDR5BQ86VZ2 330 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 SLC9A9Q8IVB4 645 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 SFTPA1Q8IWL2 248 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 SMYD4Q8IYR2 804 aaPredicted RBP12.86□□□□□ -0.35
TRAIP-203ENST00000473195 NUP93Q8N1F7 819 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 SYNPOQ8N3V7 929 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 C12orf29Q8N999 325 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 SECISBP2LQ93073 1101 aaKnown RBP12.86□□□□□ -0.35
TRAIP-203ENST00000473195 ATP2A3Q93084 1043 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 FBXO32Q969P5 355 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 EEF2KMTQ96G04 330 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 VRTNQ9H8Y1 702 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 FAM49BQ9NUQ9 324 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 CHORDC1Q9UHD1 332 aaPredicted RBP12.86□□□□□ -0.35
TRAIP-203ENST00000473195 USP25Q9UHP3 1055 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 ANKRD11Q6UB99 2663 aaPredicted RBP12.86□□□□□ -0.35
TRAIP-203ENST00000473195 CEP250Q9BV73 2442 aa12.86□□□□□ -0.35
TRAIP-203ENST00000473195 FAM237AA0A1B0GTK4 181 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 CALUO43852 315 aaPredicted RBP12.85□□□□□ -0.35
TRAIP-203ENST00000473195 AP1G2O75843 785 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 AKAP3O75969 853 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 RHOBTB3O94955 611 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 OAS1P00973 400 aaKnown RBP12.85□□□□□ -0.35
TRAIP-203ENST00000473195 FAM163BP0C2L3 166 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 PTMSP20962 102 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 NR2F2P24468 414 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 YWHAQP27348 245 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 OPRD1P41143 372 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 SLC6A11P48066 632 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 AP3M2P53677 418 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 SLC5A3P53794 718 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 MESP2Q0VG99 397 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 KRBA2Q6ZNG9 492 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 CEP68Q76N32 757 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 FUKQ8N0W3 1084 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 FAM160A2Q8N612 972 aaPredicted RBP12.85□□□□□ -0.35
TRAIP-203ENST00000473195 ZMIZ2Q8NF64 920 aa12.85□□□□□ -0.35
TRAIP-203ENST00000473195 WBP2Q969T9 261 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms