RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 ELOVL4Q9GZR5 314 aa17.73■□□□□ 0.43
USP40-212ENST00000473191 SCAND2PQ9GZW5 306 aaPredicted RBP17.73■□□□□ 0.43
USP40-212ENST00000473191 MMRN2Q9H8L6 949 aa17.73■□□□□ 0.43
USP40-212ENST00000473191 PARD6AQ9NPB6 346 aa17.73■□□□□ 0.43
USP40-212ENST00000473191 TRPM5Q9NZQ8 1165 aa17.73■□□□□ 0.43
USP40-212ENST00000473191 NCDNQ9UBB6 729 aa17.73■□□□□ 0.43
USP40-212ENST00000473191 CHORDC1Q9UHD1 332 aaPredicted RBP17.73■□□□□ 0.43
USP40-212ENST00000473191 MYO16Q9Y6X6 1858 aa17.73■□□□□ 0.43
USP40-212ENST00000473191 GPR179Q6PRD1 2367 aa17.73■□□□□ 0.43
USP40-212ENST00000473191 OTOGLQ3ZCN5 2332 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 TNFRSF10BO14763 440 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 CALUO43852 315 aaPredicted RBP17.72■□□□□ 0.43
USP40-212ENST00000473191 RNF40O75150 1001 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 OLFM2O95897 454 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 OAS1P00973 400 aaKnown RBP17.72■□□□□ 0.43
USP40-212ENST00000473191 GCLMP48507 274 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 IFNAR2P48551 515 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 VAMP7P51809 220 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 NDST1P52848 882 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 AP3M2P53677 418 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 PNOCQ13519 176 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 PDGFRLQ15198 375 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 ZCWPW2Q504Y3 356 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 PRR23BQ6ZRT6 265 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 SFTPA1Q8IWL2 248 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 TAS1R2Q8TE23 839 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 WBP2Q969T9 261 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 SMOQ99835 787 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 MED10Q9BTT4 135 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 FAM49BQ9NUQ9 324 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 CPQQ9Y646 472 aa17.72■□□□□ 0.43
USP40-212ENST00000473191 GVINP1Q7Z2Y8 2422 aa17.71■□□□□ 0.43
USP40-212ENST00000473191 KIAA1549LQ6ZVL6 1849 aa17.71■□□□□ 0.43
USP40-212ENST00000473191 PAPSS2O95340 614 aaPredicted RBP17.71■□□□□ 0.43
USP40-212ENST00000473191 ASS1P00966 412 aaKnown RBP17.71■□□□□ 0.43
USP40-212ENST00000473191 TCF3P15923 654 aa17.71■□□□□ 0.43
USP40-212ENST00000473191 PIK3CAP42336 1068 aa17.71■□□□□ 0.43
USP40-212ENST00000473191 SLC5A3P53794 718 aa17.71■□□□□ 0.43
USP40-212ENST00000473191 MESP2Q0VG99 397 aa17.71■□□□□ 0.43
USP40-212ENST00000473191 GRSF1Q12849 480 aaKnown RBP eCLIP17.71■□□□□ 0.43
USP40-212ENST00000473191 SGSM1Q2NKQ1 1148 aa17.71■□□□□ 0.43
USP40-212ENST00000473191 NUP93Q8N1F7 819 aa17.71■□□□□ 0.43
USP40-212ENST00000473191 CPA6Q8N4T0 437 aa17.71■□□□□ 0.43
USP40-212ENST00000473191 P2RY13Q9BPV8 354 aa17.71■□□□□ 0.43
USP40-212ENST00000473191 KRT82Q9NSB4 513 aa17.71■□□□□ 0.43
USP40-212ENST00000473191 FRMD4BQ9Y2L6 1034 aa17.71■□□□□ 0.43
USP40-212ENST00000473191 WDR87Q6ZQQ6 2873 aa17.71■□□□□ 0.43
USP40-212ENST00000473191 EP300Q09472 2414 aaPredicted RBP17.7■□□□□ 0.42
USP40-212ENST00000473191 OPRD1P41143 372 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 NRLP54845 237 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 SLC7A9P82251 487 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 PPP2R5DQ14738 602 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 NFIL3Q16649 462 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 GPRIN1Q7Z2K8 1008 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 FILIP1Q7Z7B0 1213 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 LONP2Q86WA8 852 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 FMR1NBQ8N0W7 255 aaPredicted RBP17.7■□□□□ 0.42
USP40-212ENST00000473191 SYNPOQ8N3V7 929 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 GUF1Q8N442 669 aaKnown RBP17.7■□□□□ 0.42
USP40-212ENST00000473191 SLC2A14Q8TDB8 520 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 WHAMMQ8TF30 809 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 SEMA4DQ92854 862 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 CD101Q93033 1021 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 ZFRQ96KR1 1074 aaKnown RBP17.7■□□□□ 0.42
USP40-212ENST00000473191 CEP295NLQ96MC4 621 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 CCSER2Q9H7U1 834 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 ZNF292O60281 2723 aa17.7■□□□□ 0.42
USP40-212ENST00000473191 IKBKBO14920 756 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 COCHO43405 550 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 AP1G2O75843 785 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 YWHAQP27348 245 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 PMS1P54277 932 aaKnown RBP17.69■□□□□ 0.42
USP40-212ENST00000473191 MAP3K7CLP57077 242 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 SPEM2Q0P670 501 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 ADAM9Q13443 819 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 SIM2Q14190 667 aaPredicted RBP17.69■□□□□ 0.42
USP40-212ENST00000473191 C12orf40Q86WS4 652 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 FAM186BQ8IYM0 893 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 RPLP0P6Q8NHW5 317 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 ATP2A3Q93084 1043 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 FBXO32Q969P5 355 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 SMARCD1Q96GM5 515 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 HHIPQ96QV1 700 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 IL37Q9NZH6 218 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 GMIPQ9P107 970 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 CFAP97Q9P2B7 532 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 EML5Q05BV3 1969 aa17.69■□□□□ 0.42
USP40-212ENST00000473191 MAPK13O15264 365 aa17.68■□□□□ 0.42
USP40-212ENST00000473191 CYP17A1P05093 508 aa17.68■□□□□ 0.42
USP40-212ENST00000473191 MBL2P11226 248 aaPredicted RBP17.68■□□□□ 0.42
USP40-212ENST00000473191 ADORA2BP29275 332 aa17.68■□□□□ 0.42
USP40-212ENST00000473191 PRCPP42785 496 aa17.68■□□□□ 0.42
USP40-212ENST00000473191 SLC6A11P48066 632 aa17.68■□□□□ 0.42
USP40-212ENST00000473191 RSPO4Q2I0M5 234 aaPredicted RBP17.68■□□□□ 0.42
USP40-212ENST00000473191 ADGRG2Q8IZP9 1017 aa17.68■□□□□ 0.42
USP40-212ENST00000473191 CRYBG2Q8N1P7 616 aa17.68■□□□□ 0.42
USP40-212ENST00000473191 ENGASEQ8NFI3 743 aa17.68■□□□□ 0.42
USP40-212ENST00000473191 JAKMIP2Q96AA8 810 aa17.68■□□□□ 0.42
USP40-212ENST00000473191 TNIP3Q96KP6 325 aa17.68■□□□□ 0.42
USP40-212ENST00000473191 SLITRK1Q96PX8 696 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms