RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 C16orf70Q9BSU1 422 aa8.02□□□□□ -1.13
CCDC171-205ENST00000472806 NT5C1AQ9BXI3 368 aa8.02□□□□□ -1.13
CCDC171-205ENST00000472806 HEMGNQ9BXL5 484 aa8.02□□□□□ -1.13
CCDC171-205ENST00000472806 TRIM7Q9C029 511 aa8.02□□□□□ -1.13
CCDC171-205ENST00000472806 CDC42EP4Q9H3Q1 356 aaKnown RBP8.02□□□□□ -1.13
CCDC171-205ENST00000472806 SEMA4AQ9H3S1 761 aa8.02□□□□□ -1.13
CCDC171-205ENST00000472806 CYLDQ9NQC7 956 aa8.02□□□□□ -1.13
CCDC171-205ENST00000472806 DPP3Q9NY33 737 aa8.02□□□□□ -1.13
CCDC171-205ENST00000472806 SLC12A6Q9UHW9 1150 aa8.02□□□□□ -1.13
CCDC171-205ENST00000472806 CDV3Q9UKY7 258 aaKnown RBP8.02□□□□□ -1.13
CCDC171-205ENST00000472806 TPX2Q9ULW0 747 aaKnown RBP8.02□□□□□ -1.13
CCDC171-205ENST00000472806 POLIQ9UNA4 740 aa8.02□□□□□ -1.13
CCDC171-205ENST00000472806 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.02□□□□□ -1.13
CCDC171-205ENST00000472806 AGAP1Q9UPQ3 857 aa8.02□□□□□ -1.13
CCDC171-205ENST00000472806 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.02□□□□□ -1.13
CCDC171-205ENST00000472806 NRCAMQ92823 1304 aa8.02□□□□□ -1.13
CCDC171-205ENST00000472806 A0A087WUV0 522 aaPredicted RBP8.01□□□□□ -1.13
CCDC171-205ENST00000472806 GOLGA8SH3BPF8 625 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 M0QYV0 167 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 MYO1CO00159 1063 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 TRAPPC3O43617 180 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 TSPAN1O60635 241 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 CAND2O75155 1236 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 MICAL2O94851 1124 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 CD4P01730 458 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 YBX3P16989 372 aaKnown RBP eCLIP8.01□□□□□ -1.13
CCDC171-205ENST00000472806 FGFR4P22455 802 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 PNPLA4P41247 253 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 ADCYAP1R1P41586 468 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 MAGEA9P43362 315 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 MMP13P45452 471 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 VCPP55072 806 aaKnown RBP8.01□□□□□ -1.13
CCDC171-205ENST00000472806 CORO7P57737 925 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 RPL7AP62424 266 aaKnown RBP8.01□□□□□ -1.13
CCDC171-205ENST00000472806 TFDP2Q14188 446 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 SKIDA1Q1XH10 827 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 SLC10A6Q3KNW5 377 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 PTPN20Q4JDL3 420 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 FAM47CQ5HY64 1035 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 KAZNQ674X7 775 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 HIBCHQ6NVY1 386 aaPredicted RBP8.01□□□□□ -1.13
CCDC171-205ENST00000472806 NOTUMQ6P988 496 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 SLC27A1Q6PCB7 646 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 LCLAT1Q6UWP7 414 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 MFSD7Q6UXD7 560 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 BBS12Q6ZW61 710 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 UNC93AQ86WB7 457 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 VSIG1Q86XK7 387 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 MAP7D3Q8IWC1 876 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 ALLCQ8N6M5 410 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 SLC4A11Q8NBS3 891 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 MYCBPAPQ8TBZ2 947 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 ATG4AQ8WYN0 398 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 TFAP2BQ92481 460 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 MCRS1Q96EZ8 462 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 CHMP6Q96FZ7 201 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 MAML3Q96JK9 1138 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 HEXIM2Q96MH2 286 aaKnown RBP8.01□□□□□ -1.13
CCDC171-205ENST00000472806 ZNF560Q96MR9 790 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 XPO6Q96QU8 1125 aaKnown RBP8.01□□□□□ -1.13
CCDC171-205ENST00000472806 SELENOSQ9BQE4 189 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 TINF2Q9BSI4 451 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 KATNAL1Q9BW62 490 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 MAK16Q9BXY0 300 aaKnown RBP8.01□□□□□ -1.13
CCDC171-205ENST00000472806 KATNBL1Q9H079 304 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 RASSF4Q9H2L5 321 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 EPB41L4BQ9H329 900 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 MINDY3Q9H8M7 445 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 RSAD1Q9HA92 442 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 PCDH9Q9HC56 1237 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 PPANQ9NQ55 473 aaKnown RBP8.01□□□□□ -1.13
CCDC171-205ENST00000472806 INTS9Q9NV88 658 aaKnown RBP8.01□□□□□ -1.13
CCDC171-205ENST00000472806 HESX1Q9UBX0 185 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 SIX4Q9UIU6 781 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 SHOC2Q9UQ13 582 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 NEU2Q9Y3R4 380 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 ACTL7BQ9Y614 415 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 ZNF236Q9UL36 1845 aa8.01□□□□□ -1.13
CCDC171-205ENST00000472806 PLXNA1Q9UIW2 1896 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 SMIM35A0A1B0GVV1 85 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 C5orf60A6NFR6 353 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 F8VP50 259 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 SGK1O00141 431 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 TULP2O00295 520 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 O00370 1275 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 MCF2LO15068 1137 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 CDH16O75309 829 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 ZNF189O75820 626 aaPredicted RBP8□□□□□ -1.13
CCDC171-205ENST00000472806 TOMM70O94826 608 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 SNAI1O95863 264 aaPredicted RBP8□□□□□ -1.13
CCDC171-205ENST00000472806 VTNP04004 478 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 SHBGP04278 402 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 ERBB2P04626 1255 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 GJB1P08034 283 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 ZNF286BP0CG31 522 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 GNAT1P11488 350 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 TSHRP16473 764 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 GPD1P21695 349 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 IVDP26440 423 aa8□□□□□ -1.13
CCDC171-205ENST00000472806 KLRC2P26717 231 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms