RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 GABRR2P28476 465 aa21.09■□□□□ 0.97
SF1-213ENST00000472725 KRT9P35527 623 aa21.09■□□□□ 0.97
SF1-213ENST00000472725 NTHL1P78549 312 aa21.09■□□□□ 0.97
SF1-213ENST00000472725 PDE4CQ08493 712 aa21.09■□□□□ 0.97
SF1-213ENST00000472725 ARHGAP15Q53QZ3 475 aa21.09■□□□□ 0.97
SF1-213ENST00000472725 RAB41Q5JT25 222 aa21.09■□□□□ 0.97
SF1-213ENST00000472725 SPECC1LQ69YQ0 1117 aa21.09■□□□□ 0.97
SF1-213ENST00000472725 PIGZQ86VD9 579 aa21.09■□□□□ 0.97
SF1-213ENST00000472725 FEZF2Q8TBJ5 459 aa21.09■□□□□ 0.97
SF1-213ENST00000472725 TRIM5Q9C035 493 aa21.09■□□□□ 0.97
SF1-213ENST00000472725 ZNF334Q9HCZ1 680 aaPredicted RBP21.09■□□□□ 0.97
SF1-213ENST00000472725 CDH7Q9ULB5 785 aa21.09■□□□□ 0.97
SF1-213ENST00000472725 MAGED2Q9UNF1 606 aaPredicted RBP21.09■□□□□ 0.97
SF1-213ENST00000472725 CEP83Q9Y592 693 aa21.09■□□□□ 0.97
SF1-213ENST00000472725 GFPT2O94808 682 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 PNMA6AP0CW24 399 aaPredicted RBP21.08■□□□□ 0.97
SF1-213ENST00000472725 GPD2P43304 727 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 KIF11P52732 1056 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 PLCB2Q00722 1185 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 MTMR3Q13615 1198 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 SLC5A9Q2M3M2 681 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 GAREM2Q75VX8 874 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 ZDHHC14Q8IZN3 488 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 SCML4Q8N228 414 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 SHKBP1Q8TBC3 707 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 EPS8L1Q8TE68 723 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 SYN2Q92777 582 aaPredicted RBP21.08■□□□□ 0.97
SF1-213ENST00000472725 AIPL1Q9NZN9 384 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 EPS15L1Q9UBC2 864 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 CAPN11Q9UMQ6 739 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 SCML2Q9UQR0 700 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 USP3Q9Y6I4 520 aa21.08■□□□□ 0.97
SF1-213ENST00000472725 OBSL1O75147 1896 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 PRUNE2Q8WUY3 3088 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 MOSPD3O75425 235 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 WEE1P30291 646 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 CCR2P41597 374 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 ACADSBP45954 432 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 RPL34P49207 117 aaKnown RBP21.07■□□□□ 0.96
SF1-213ENST00000472725 SNX16P57768 344 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 ZBED6P86452 979 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 SNX30Q5VWJ9 437 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 GET4Q7L5D6 327 aaPredicted RBP21.07■□□□□ 0.96
SF1-213ENST00000472725 VSTM4Q8IW00 320 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 TDRD5Q8NAT2 981 aaKnown RBP21.07■□□□□ 0.96
SF1-213ENST00000472725 ITFG1Q8TB96 612 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 UBA3Q8TBC4 463 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 DDX1Q92499 740 aaKnown RBP21.07■□□□□ 0.96
SF1-213ENST00000472725 MRPS31Q92665 395 aaKnown RBP21.07■□□□□ 0.96
SF1-213ENST00000472725 FGF13Q92913 245 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 SECISBP2LQ93073 1101 aaKnown RBP21.07■□□□□ 0.96
SF1-213ENST00000472725 NOX5Q96PH1 765 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 ATXN3LQ9H3M9 355 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 LRRC4Q9HBW1 653 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 ACP6Q9NPH0 428 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 TRPM5Q9NZQ8 1165 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 DOCK8Q8NF50 2099 aa21.07■□□□□ 0.96
SF1-213ENST00000472725 A0A1W2PRU2 124 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 LOC730098B7Z3J9 87 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 LSM8O95777 96 aaKnown RBP21.06■□□□□ 0.96
SF1-213ENST00000472725 GBP2P32456 591 aaPredicted RBP21.06■□□□□ 0.96
SF1-213ENST00000472725 CDH5P33151 784 aaPredicted RBP21.06■□□□□ 0.96
SF1-213ENST00000472725 PSEN1P49768 467 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 USP46P62068 366 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 CDR2Q01850 454 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 ZP2Q05996 745 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 TAF10Q12962 218 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 TRIM72Q6ZMU5 477 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 CCDC186Q7Z3E2 898 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 TMEM150AQ86TG1 271 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 NPAS3Q8IXF0 933 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 FBXO32Q969P5 355 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 NXPE3Q969Y0 559 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 TCEAL4Q96EI5 215 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 MRFAP1L1Q96HT8 127 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 PDCL3Q9H2J4 239 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 TASP1Q9H6P5 420 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 CNGB3Q9NQW8 809 aa21.06■□□□□ 0.96
SF1-213ENST00000472725 NOCTQ9UK39 431 aaKnown RBP21.06■□□□□ 0.96
SF1-213ENST00000472725 LUC7L2Q9Y383 392 aaKnown RBP21.06■□□□□ 0.96
SF1-213ENST00000472725 C19orf67A6NJJ6 358 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 LRRC53A6NM62 1247 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 CALCAP01258 141 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 TPM1P09493 284 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 ZDHHC11BP0C7U3 371 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 LAMP2P13473 410 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 PTPN21Q16825 1174 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 SFMBT2Q5VUG0 894 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 PM20D1Q6GTS8 502 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 NOP9Q86U38 636 aaKnown RBP21.05■□□□□ 0.96
SF1-213ENST00000472725 MON1AQ86VX9 555 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 ARHGAP18Q8N392 663 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 TMEM35BQ8NCS4 154 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 STKLD1Q8NE28 680 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 SCAMP5Q8TAC9 235 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 TLR8Q9NR97 1041 aaKnown RBP21.05■□□□□ 0.96
SF1-213ENST00000472725 BZW2Q9Y6E2 419 aaKnown RBP21.05■□□□□ 0.96
SF1-213ENST00000472725 ANAPC1Q9H1A4 1944 aa21.05■□□□□ 0.96
SF1-213ENST00000472725 ZNF840PA6NDX5 716 aa21.04■□□□□ 0.96
SF1-213ENST00000472725 FBXO21O94952 628 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms