RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 PTK6Q13882 451 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.74□□□□□ -0.37
IRF1-208ENST00000472045 KCNT1Q5JUK3 1230 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 ZDHHC17Q8IUH5 632 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 EMC1Q8N766 993 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 PPWD1Q96BP3 646 aaKnown RBP12.74□□□□□ -0.37
IRF1-208ENST00000472045 RSRC1Q96IZ7 334 aaKnown RBP12.74□□□□□ -0.37
IRF1-208ENST00000472045 MS4A14Q96JA4 679 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 RBM15Q96T37 977 aaKnown RBP eCLIP12.74□□□□□ -0.37
IRF1-208ENST00000472045 TRIM55Q9BYV6 548 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 CDT1Q9H211 546 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 ARHGAP10A1A4S6 786 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 MOXD2PA6NHM9 499 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 SMAPO00193 183 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 PCDH8O95206 1070 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 FDFT1P37268 417 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 CTCFP49711 727 aaPredicted RBP12.74□□□□□ -0.37
IRF1-208ENST00000472045 HSDL1Q3SXM5 330 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 DDIASQ8IXT1 998 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 CNPY4Q8N129 248 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 SRPK1Q96SB4 655 aaKnown RBP12.74□□□□□ -0.37
IRF1-208ENST00000472045 SPATA16Q9BXB7 569 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 GOLPH3Q9H4A6 298 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 VCX3AQ9NNX9 186 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 APOBEC2Q9Y235 224 aaKnown RBP12.74□□□□□ -0.37
IRF1-208ENST00000472045 VPS9D1Q9Y2B5 631 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 ROBO3Q96MS0 1386 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 SLC9A3R1O14745 358 aaPredicted RBP12.74□□□□□ -0.37
IRF1-208ENST00000472045 MICAL2O94851 1124 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 CHRM3P20309 590 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 RRM1P23921 792 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 KCNA1Q09470 495 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 NUGGCQ68CJ6 796 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 LRRC8DQ7L1W4 858 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 APBB2Q92870 758 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 BTBD6Q96KE9 485 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 CORO1BQ9BR76 489 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 PLAGL2Q9UPG8 496 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 USP27XA6NNY8 438 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 CCDC130P13994 396 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 HMOX2P30519 316 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 GCNT1Q02742 428 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 NUDCD3Q8IVD9 361 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 GSPT2Q8IYD1 628 aaKnown RBP12.74□□□□□ -0.37
IRF1-208ENST00000472045 FAM105AQ9NUU6 356 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 AAR2Q9Y312 384 aaKnown RBP12.74□□□□□ -0.37
IRF1-208ENST00000472045 NEU2Q9Y3R4 380 aa12.74□□□□□ -0.37
IRF1-208ENST00000472045 CICQ96RK0 1608 aaPredicted RBP12.73□□□□□ -0.37
IRF1-208ENST00000472045 GPR25O00155 361 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 VCLP18206 1134 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 LAG3P18627 525 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 RPL9P32969 192 aaKnown RBP12.73□□□□□ -0.37
IRF1-208ENST00000472045 ATXN3P54252 364 aaPredicted RBP12.73□□□□□ -0.37
IRF1-208ENST00000472045 FBXW4P57775 412 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 STAT4Q14765 748 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 PSMD5Q16401 504 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 CLEC16AQ2KHT3 1053 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 DLK2Q6UY11 383 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 RAD9BQ6WBX8 426 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 ZNF606Q8WXB4 792 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 NCLNQ969V3 563 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 TRIM51Q9BSJ1 452 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 TRIM10Q9UDY6 481 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 USP18Q9UMW8 372 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 TRAV19A0A0A6YYK7 116 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 HEATR9A2RTY3 570 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 ITGB3BPQ13352 177 aaPredicted RBP12.73□□□□□ -0.37
IRF1-208ENST00000472045 TMA16Q96EY4 203 aaKnown RBP12.73□□□□□ -0.37
IRF1-208ENST00000472045 ACO2Q99798 780 aaKnown RBP12.73□□□□□ -0.37
IRF1-208ENST00000472045 TUBB6Q9BUF5 446 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 APOL5Q9BWW9 433 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 SENP1Q9P0U3 644 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 ORC6Q9Y5N6 252 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 A0A087X0T9 212 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 A0A0G2JND7 137 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 UNCXA6NJT0 531 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 CXCL14O95715 111 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 FAM228BP0C875 321 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 PTPN1P18031 435 aaKnown RBP12.73□□□□□ -0.37
IRF1-208ENST00000472045 FSCBQ5H9T9 825 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 OTOP2Q7RTS6 562 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 SLC20A1Q8WUM9 679 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 EFHD1Q9BUP0 239 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 PITPNM3Q9BZ71 974 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.73□□□□□ -0.37
IRF1-208ENST00000472045 PCDHGB4Q9UN71 923 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 CHD2O14647 1828 aaKnown RBP12.73□□□□□ -0.37
IRF1-208ENST00000472045 GJB1P08034 283 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 NFICP08651 508 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 STIP1P31948 543 aaKnown RBP12.73□□□□□ -0.37
IRF1-208ENST00000472045 COBLL1Q53SF7 1204 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 DCLRE1AQ6PJP8 1040 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 DSG4Q86SJ6 1040 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 ZNF669Q96BR6 464 aaPredicted RBP12.73□□□□□ -0.37
IRF1-208ENST00000472045 EML4Q9HC35 981 aaKnown RBP12.73□□□□□ -0.37
IRF1-208ENST00000472045 CHMP2BQ9UQN3 213 aa12.73□□□□□ -0.37
IRF1-208ENST00000472045 ZNF185O15231 689 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 RAMP2O60895 175 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
IRF1-208ENST00000472045 CAPRIN1Q14444 709 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms