RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 USP46P62068 366 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 NR1H3Q13133 447 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 ADAM9Q13443 819 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 EDRF1Q3B7T1 1238 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 TRIM68Q6AZZ1 485 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 TSSK4Q6SA08 328 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 CRYBG2Q8N1P7 616 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 GPR161Q8N6U8 529 aaKnown RBP14.34□□□□□ -0.11
HMGN1-211ENST00000471260 PDZD8Q8NEN9 1154 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 SECISBP2LQ93073 1101 aaKnown RBP14.34□□□□□ -0.11
HMGN1-211ENST00000471260 FAXDC2Q96IV6 333 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 SLC22A12Q96S37 553 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 B3GNT5Q9BYG0 378 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 GTPBP4Q9BZE4 634 aaKnown RBP14.34□□□□□ -0.11
HMGN1-211ENST00000471260 IMPG2Q9BZV3 1241 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 ZNF518BQ9C0D4 1074 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 SMYD3Q9H7B4 428 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 ECT2Q9H8V3 914 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 GDPD2Q9HCC8 539 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 RMND1Q9NWS8 449 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 DUS2Q9NX74 493 aaKnown RBP14.34□□□□□ -0.11
HMGN1-211ENST00000471260 ANAPC1Q9H1A4 1944 aa14.34□□□□□ -0.11
HMGN1-211ENST00000471260 C2orf78A6NCI8 922 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 OTOL1A6NHN0 477 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-211ENST00000471260 ATG13O75143 517 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 OLFM2O95897 454 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 DRD1P21728 446 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 YWHAQP27348 245 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 GTF2H1P32780 548 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 IFNAR2P48551 515 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 SLC7A9P82251 487 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 TAF10Q12962 218 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 FBXO43Q4G163 708 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 ZCWPW2Q504Y3 356 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 COBLL1Q53SF7 1204 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 WDR44Q5JSH3 913 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 C1orf220Q5T0J3 134 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 FAM186BQ8IYM0 893 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 FMR1NBQ8N0W7 255 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-211ENST00000471260 RIN3Q8TB24 985 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 SH3RF2Q8TEC5 729 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 SMARCD1Q96GM5 515 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 GSDMAQ96QA5 445 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 DNAI2Q9GZS0 605 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 DMAP1Q9NPF5 467 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-211ENST00000471260 RBM12Q9NTZ6 932 aaKnown RBP14.33□□□□□ -0.12
HMGN1-211ENST00000471260 IL37Q9NZH6 218 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 MAPK8IP1Q9UQF2 711 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 EP300Q09472 2414 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-211ENST00000471260 CFAP54Q96N23 3096 aa14.33□□□□□ -0.12
HMGN1-211ENST00000471260 GVINP1Q7Z2Y8 2422 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 CLDN5O00501 218 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 OAS1P00973 400 aaKnown RBP14.32□□□□□ -0.12
HMGN1-211ENST00000471260 HLA-DRAP01903 254 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 ARSAP15289 507 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 GJA4P35212 333 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 PIK3CAP42336 1068 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 CACNA2D1P54289 1103 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 SATB1Q01826 763 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 EML3Q32P44 896 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 SNX30Q5VWJ9 437 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 FAM35AQ86V20 835 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 DDX42Q86XP3 938 aaKnown RBP eCLIP14.32□□□□□ -0.122e-7■□□□□ 9.2
HMGN1-211ENST00000471260 CCDC150Q8NCX0 1101 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 CCDC26Q8TAB7 109 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 HINFPQ9BQA5 517 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 MED10Q9BTT4 135 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 SDCBP2Q9H190 292 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 CYP3A43Q9HB55 503 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 TMEM8AQ9HCN3 771 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 TMEM30AQ9NV96 361 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 HOOK1Q9UJC3 728 aaKnown RBP14.32□□□□□ -0.12
HMGN1-211ENST00000471260 ZKSCAN5Q9Y2L8 839 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 OTOGLQ3ZCN5 2332 aa14.32□□□□□ -0.12
HMGN1-211ENST00000471260 CCDC163A0A0D9SF12 145 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 FAM92AA1XBS5 289 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 CHURC1-FNTBB4DL54 471 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 K7ESF4 209 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 LEFTY2O00292 366 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 SLC9A3R1O14745 358 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-211ENST00000471260 TNFRSF10BO14763 440 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 STX10O60499 249 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 NFATC1O95644 943 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 ASPAP45381 313 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 RAP1GAPP47736 663 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 TUBP50607 506 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 GALK1P51570 392 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 NDST1P52848 882 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 INCA1Q0VD86 236 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 KRT39Q6A163 491 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 FSTL4Q6MZW2 842 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 SCARA5Q6ZMJ2 495 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 Q6ZS52 159 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 PAQR9Q6ZVX9 377 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 ACOT1Q86TX2 421 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 LONP2Q86WA8 852 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 ELOA2Q8IYF1 753 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-211ENST00000471260 FUKQ8N0W3 1084 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 SPATA20Q8TB22 786 aa14.31□□□□□ -0.12
HMGN1-211ENST00000471260 CHFRQ96EP1 664 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms