RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 KLHDC7AQ5VTJ3 777 aa20.88■□□□□ 0.93
HDAC7-220ENST00000471235 ANKRD52Q8NB46 1076 aa20.88■□□□□ 0.93
HDAC7-220ENST00000471235 FBXO32Q969P5 355 aa20.88■□□□□ 0.93
HDAC7-220ENST00000471235 GANQ9H2C0 597 aa20.88■□□□□ 0.93
HDAC7-220ENST00000471235 TRPV4Q9HBA0 871 aa20.88■□□□□ 0.93
HDAC7-220ENST00000471235 IL37Q9NZH6 218 aa20.88■□□□□ 0.93
HDAC7-220ENST00000471235 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.88■□□□□ 0.93
HDAC7-220ENST00000471235 SIK3Q9Y2K2 1263 aa20.88■□□□□ 0.93
HDAC7-220ENST00000471235 PI4K2BG5E9Z4 385 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 PRAMEF12O95522 483 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 CAVIN2O95810 425 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 ZXDAP98168 799 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 TXNDC8Q6A555 127 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 TANGO2Q6ICL3 276 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 LCLAT1Q6UWP7 414 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 SLC44A3Q8N4M1 653 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 MAB21L3Q8N8X9 362 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 ELSPBP1Q96BH3 223 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 SLITRK1Q96PX8 696 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 NAA15Q9BXJ9 866 aaKnown RBP20.87■□□□□ 0.93
HDAC7-220ENST00000471235 SLC46A2Q9BY10 475 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 PLA2G2FQ9BZM2 168 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 PLCB1Q9NQ66 1216 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 COMMD8Q9NX08 183 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 HESX1Q9UBX0 185 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 ZMYM5Q9UJ78 669 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 DUSP12Q9UNI6 340 aa20.87■□□□□ 0.93
HDAC7-220ENST00000471235 FAM92AA1XBS5 289 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 TULP2O00295 520 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 NARSO43776 548 aaKnown RBP20.86■□□□□ 0.93
HDAC7-220ENST00000471235 PNMA6AP0CW24 399 aaPredicted RBP20.86■□□□□ 0.93
HDAC7-220ENST00000471235 ALADP13716 330 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 UCHL3P15374 230 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 RFX1P22670 979 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 USP8P40818 1118 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 VIPR2P41587 438 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 PDE4CQ08493 712 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 BST2Q10589 180 aaKnown RBP20.86■□□□□ 0.93
HDAC7-220ENST00000471235 RAPGEF1Q13905 1077 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 SYCP1Q15431 976 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 PKDCCQ504Y2 493 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 MON1AQ86VX9 555 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 ARID3BQ8IVW6 561 aaPredicted RBP20.86■□□□□ 0.93
HDAC7-220ENST00000471235 RSPRY1Q96DX4 576 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 EPHX3Q9H6B9 360 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 ZFP14Q9HCL3 533 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 TRPC7Q9HCX4 862 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 TRPM5Q9NZQ8 1165 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 GMIPQ9P107 970 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 COL4A3Q01955 1670 aa20.86■□□□□ 0.93
HDAC7-220ENST00000471235 MIA3Q5JRA6 1907 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 C2orf78A6NCI8 922 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 ZNF840PA6NDX5 716 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 SOBPA7XYQ1 873 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 M0QYV0 167 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 XPO1O14980 1071 aaKnown RBP20.85■□□□□ 0.93
HDAC7-220ENST00000471235 EPHB6O15197 1021 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 WEE1P30291 646 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 GNA15P30679 374 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 UBXN1Q04323 297 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 STILQ15468 1287 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 CNGA2Q16280 664 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 SMYD5Q6GMV2 418 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 LRSAM1Q6UWE0 723 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 VITQ6UXI7 678 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 PIGZQ86VD9 579 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 GPIHBP1Q8IV16 184 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 UBALD2Q8IYN6 164 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 CMTM8Q8IZV2 173 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 PDZD8Q8NEN9 1154 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 UBA3Q8TBC4 463 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 OVCA2Q8WZ82 227 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 EDAQ92838 391 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 ERGIC2Q96RQ1 377 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 SLC22A12Q96S37 553 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 SMG9Q9H0W8 520 aaKnown RBP20.85■□□□□ 0.93
HDAC7-220ENST00000471235 FBXO44Q9H4M3 255 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 ACP6Q9NPH0 428 aa20.85■□□□□ 0.93
HDAC7-220ENST00000471235 FAM207AQ9NSI2 230 aaPredicted RBP20.85■□□□□ 0.93
HDAC7-220ENST00000471235 TRIOO75962 3097 aa20.84■□□□□ 0.93
HDAC7-220ENST00000471235 KMT2EQ8IZD2 1858 aa20.84■□□□□ 0.93
HDAC7-220ENST00000471235 FOXN3O00409 490 aaPredicted RBP20.84■□□□□ 0.93
HDAC7-220ENST00000471235 SETSIPP0DME0 302 aa20.84■□□□□ 0.93
HDAC7-220ENST00000471235 PPP3CCP48454 512 aa20.84■□□□□ 0.93
HDAC7-220ENST00000471235 KIF11P52732 1056 aa20.84■□□□□ 0.93
HDAC7-220ENST00000471235 SLC8A3P57103 927 aa20.84■□□□□ 0.93
HDAC7-220ENST00000471235 DRAP1Q14919 205 aaPredicted RBP20.84■□□□□ 0.93
HDAC7-220ENST00000471235 UBXN6Q9BZV1 441 aa20.84■□□□□ 0.93
HDAC7-220ENST00000471235 TSPY26PQ9H489 355 aa20.84■□□□□ 0.93
HDAC7-220ENST00000471235 TRAV19A0A0A6YYK7 116 aa20.83■□□□□ 0.93
HDAC7-220ENST00000471235 HEPACAM2A8MVW5 462 aa20.83■□□□□ 0.93
HDAC7-220ENST00000471235 CYP26A1O43174 497 aa20.83■□□□□ 0.93
HDAC7-220ENST00000471235 THAP12O43422 761 aa20.83■□□□□ 0.93
HDAC7-220ENST00000471235 ZDHHC11BP0C7U3 371 aa20.83■□□□□ 0.93
HDAC7-220ENST00000471235 SRFP11831 508 aa20.83■□□□□ 0.93
HDAC7-220ENST00000471235 AVPR1AP37288 418 aa20.83■□□□□ 0.93
HDAC7-220ENST00000471235 PLA2G4AP47712 749 aa20.83■□□□□ 0.93
HDAC7-220ENST00000471235 TPM4P67936 248 aa20.83■□□□□ 0.93
HDAC7-220ENST00000471235 GRM2Q14416 872 aa20.83■□□□□ 0.93
HDAC7-220ENST00000471235 RAB41Q5JT25 222 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms