RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 MMS19Q96T76 1030 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 GAD1Q99259 594 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 APOL6Q9BWW8 343 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 ELOVL4Q9GZR5 314 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 SDCBP2Q9H190 292 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 SNX25Q9H3E2 840 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 MFSD1Q9H3U5 465 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 HESX1Q9UBX0 185 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 CNOT8Q9UFF9 292 aaKnown RBP9.66□□□□□ -0.86
PTPRE-207ENST00000471218 POLIQ9UNA4 740 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 M0QZQ0 153 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 MYO1FO00160 1098 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 TRAPPC3O43617 180 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 ERBB2P04626 1255 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 CD19P15391 556 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 DESP17661 470 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 ABCB4P21439 1286 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 IBSPP21815 317 aaPredicted RBP9.65□□□□□ -0.86
PTPRE-207ENST00000471218 MCM3P25205 808 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 BRD2P25440 801 aaKnown RBP9.65□□□□□ -0.86
PTPRE-207ENST00000471218 CTNNA2P26232 953 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 GNL1P36915 607 aaPredicted RBP9.65□□□□□ -0.86
PTPRE-207ENST00000471218 RPL34P49207 117 aaKnown RBP9.65□□□□□ -0.86
PTPRE-207ENST00000471218 BCAT1P54687 386 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 SOX4Q06945 474 aaPredicted RBP9.65□□□□□ -0.86
PTPRE-207ENST00000471218 PKDCCQ504Y2 493 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 NOMO2Q5JPE7 1267 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 GLRA4Q5JXX5 417 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 CCDC70Q6NSX1 233 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 SYCE2Q6PIF2 218 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 ERMP1Q7Z2K6 904 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 TDRD5Q8NAT2 981 aaKnown RBP9.65□□□□□ -0.86
PTPRE-207ENST00000471218 ANKRD52Q8NB46 1076 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 KBTBD7Q8WVZ9 684 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 GOLGA1Q92805 767 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 ARHGEF26Q96DR7 871 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 FAM84AQ96KN4 292 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 HSFY1Q96LI6 401 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 ZFP42Q96MM3 310 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 CASD1Q96PB1 797 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 HNRNPABQ99729 332 aaKnown RBP9.65□□□□□ -0.86
PTPRE-207ENST00000471218 NUP85Q9BW27 656 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 UBXN6Q9BZV1 441 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 SEMA4AQ9H3S1 761 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 CWH43Q9H720 699 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 IP6K2Q9UHH9 426 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 SSX2IPQ9Y2D8 614 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.65□□□□□ -0.86
PTPRE-207ENST00000471218 IRAK3Q9Y616 596 aa9.65□□□□□ -0.86
PTPRE-207ENST00000471218 PDCD11Q14690 1871 aaKnown RBP9.65□□□□□ -0.86
PTPRE-207ENST00000471218 FAM186AA6NE01 2351 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 UQCRHLA0A096LP55 91 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 TCRBV5S1A1TA0A578 114 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 SIGLEC16A6NMB1 481 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 A8MXQ7 604 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 TMCO5BA8MYB1 307 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 CYB561D2O14569 222 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 SART1O43290 800 aaKnown RBP9.64□□□□□ -0.87
PTPRE-207ENST00000471218 PSTPIP1O43586 416 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 BUB1O43683 1085 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 PROSCO94903 275 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 CXCL14O95715 111 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 UQCRHP07919 91 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 CTNNA1P35221 906 aaKnown RBP9.64□□□□□ -0.87
PTPRE-207ENST00000471218 NBL1P41271 181 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 GPD2P43304 727 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 GATMP50440 423 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 SCNN1GP51170 649 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 GUCY2FP51841 1108 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 BST2Q10589 180 aaKnown RBP9.64□□□□□ -0.87
PTPRE-207ENST00000471218 ELAVL2Q12926 359 aaKnown RBP9.64□□□□□ -0.87
PTPRE-207ENST00000471218 PDCLQ13371 301 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 MAMLD1Q13495 774 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 PIGHQ14442 188 aaPredicted RBP9.64□□□□□ -0.87
PTPRE-207ENST00000471218 GLE1Q53GS7 698 aaKnown RBP9.64□□□□□ -0.87
PTPRE-207ENST00000471218 PPP1R15BQ5SWA1 713 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 ASTLQ6HA08 431 aaPredicted RBP9.64□□□□□ -0.87
PTPRE-207ENST00000471218 DNAJC24Q6P3W2 148 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 RSRC2Q7L4I2 434 aaKnown RBP9.64□□□□□ -0.87
PTPRE-207ENST00000471218 OTOP3Q7RTS5 596 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 TMEM110Q86TL2 294 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 METTL23Q86XA0 190 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 CREG2Q8IUH2 290 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 RASGEF1CQ8N431 466 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 PDCL2Q8N4E4 241 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 GPR161Q8N6U8 529 aaKnown RBP9.64□□□□□ -0.87
PTPRE-207ENST00000471218 B3GALNT2Q8NCR0 500 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 TFAP2BQ92481 460 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 UBXN4Q92575 508 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 CD101Q93033 1021 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 C18orf8Q96DM3 657 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 SUSD3Q96L08 255 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 SENP8Q96LD8 212 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 HEXIM2Q96MH2 286 aaKnown RBP9.64□□□□□ -0.87
PTPRE-207ENST00000471218 RTP3Q9BQQ7 232 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 ZSWIM1Q9BR11 485 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 ACBD6Q9BR61 282 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 TMEM175Q9BSA9 504 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 PNPLA8Q9NP80 782 aa9.64□□□□□ -0.87
PTPRE-207ENST00000471218 ACP6Q9NPH0 428 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms