RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 NADSYN1Q6IA69 706 aa3.36□□□□□ -1.87
CLIP4-209ENST00000471165 ANO7Q6IWH7 933 aa3.36□□□□□ -1.87
CLIP4-209ENST00000471165 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.36□□□□□ -1.87
CLIP4-209ENST00000471165 AOPEPQ8N6M6 819 aa3.36□□□□□ -1.87
CLIP4-209ENST00000471165 LMO3Q8TAP4 145 aa3.36□□□□□ -1.87
CLIP4-209ENST00000471165 LENG8Q96PV6 779 aaPredicted RBP3.36□□□□□ -1.87
CLIP4-209ENST00000471165 FYTTD1Q96QD9 318 aaKnown RBP3.36□□□□□ -1.87
CLIP4-209ENST00000471165 CDCP1Q9H5V8 836 aa3.36□□□□□ -1.87
CLIP4-209ENST00000471165 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.36□□□□□ -1.87
CLIP4-209ENST00000471165 PCDHAC2Q9Y5I4 1007 aa3.36□□□□□ -1.87
CLIP4-209ENST00000471165 TMEM94Q12767 1356 aa3.36□□□□□ -1.87
CLIP4-209ENST00000471165 PLCH2O75038 1416 aa3.36□□□□□ -1.87
CLIP4-209ENST00000471165 NEURL4Q96JN8 1562 aa3.35□□□□□ -1.87
CLIP4-209ENST00000471165 RNF17Q9BXT8 1623 aaKnown RBP3.35□□□□□ -1.87
CLIP4-209ENST00000471165 ANXA1P04083 346 aa3.35□□□□□ -1.87
CLIP4-209ENST00000471165 ENTPD1P49961 510 aa3.35□□□□□ -1.87
CLIP4-209ENST00000471165 PRTGQ2VWP7 1150 aa3.35□□□□□ -1.87
CLIP4-209ENST00000471165 MANEAQ5SRI9 462 aa3.35□□□□□ -1.87
CLIP4-209ENST00000471165 RMI1Q9H9A7 625 aa3.35□□□□□ -1.87
CLIP4-209ENST00000471165 MRPS18AQ9NVS2 196 aaKnown RBP3.35□□□□□ -1.87
CLIP4-209ENST00000471165 CCNL1Q9UK58 526 aaPredicted RBP3.35□□□□□ -1.87
CLIP4-209ENST00000471165 CEP350Q5VT06 3117 aa3.35□□□□□ -1.87
CLIP4-209ENST00000471165 AGLP35573 1532 aa3.34□□□□□ -1.87
CLIP4-209ENST00000471165 BTBD19C9JJ37 291 aa3.34□□□□□ -1.87
CLIP4-209ENST00000471165 PPP1R12AO14974 1030 aaPredicted RBP3.34□□□□□ -1.87
CLIP4-209ENST00000471165 RFPL3O75679 317 aa3.34□□□□□ -1.87
CLIP4-209ENST00000471165 PAPSS2O95340 614 aaPredicted RBP3.34□□□□□ -1.87
CLIP4-209ENST00000471165 SYF2O95926 243 aaKnown RBP3.34□□□□□ -1.87
CLIP4-209ENST00000471165 MTHFD2P13995 350 aa3.34□□□□□ -1.87
CLIP4-209ENST00000471165 CD19P15391 556 aa3.34□□□□□ -1.87
CLIP4-209ENST00000471165 FPR3P25089 353 aa3.34□□□□□ -1.87
CLIP4-209ENST00000471165 PABPC4Q13310 644 aaKnown RBP eCLIP3.34□□□□□ -1.87
CLIP4-209ENST00000471165 PCBP1Q15365 356 aaKnown RBP eCLIP3.34□□□□□ -1.87
CLIP4-209ENST00000471165 DALRD3Q5D0E6 543 aaKnown RBP3.34□□□□□ -1.87
CLIP4-209ENST00000471165 TMTC4Q5T4D3 741 aa3.34□□□□□ -1.87
CLIP4-209ENST00000471165 B4GALNT4Q76KP1 1039 aa3.34□□□□□ -1.87
CLIP4-209ENST00000471165 KCNK18Q7Z418 384 aa3.34□□□□□ -1.87
CLIP4-209ENST00000471165 ASIC5Q9NY37 505 aa3.34□□□□□ -1.87
CLIP4-209ENST00000471165 PCDHA7Q9UN72 937 aa3.34□□□□□ -1.87
CLIP4-209ENST00000471165 TNRQ92752 1358 aa3.34□□□□□ -1.88
CLIP4-209ENST00000471165 COL2A1P02458 1487 aaPredicted RBP3.34□□□□□ -1.88
CLIP4-209ENST00000471165 ZNF518AQ6AHZ1 1483 aa3.34□□□□□ -1.88
CLIP4-209ENST00000471165 CDK13Q14004 1512 aaKnown RBP3.34□□□□□ -1.88
CLIP4-209ENST00000471165 MYO3AQ8NEV4 1616 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 RAPGEF6Q8TEU7 1601 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 A0A0B4J293 547 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 GCATO75600 419 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 COMPP49747 757 aaPredicted RBP3.33□□□□□ -1.88
CLIP4-209ENST00000471165 TPTEP56180 551 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 RNASE12Q5GAN4 147 aaKnown RBP3.33□□□□□ -1.88
CLIP4-209ENST00000471165 LIX1LQ8IVB5 337 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 SCAMP4Q969E2 229 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 R3HDM4Q96D70 268 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 SRPK1Q96SB4 655 aaKnown RBP3.33□□□□□ -1.88
CLIP4-209ENST00000471165 C1QTNF5Q9BXJ0 243 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 ZNF556Q9HAH1 456 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 TFCP2L1Q9NZI6 479 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 CFAP74Q9C0B2 1584 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 DIP2CQ9Y2E4 1556 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 LRP5O75197 1615 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 DNMT1P26358 1616 aaKnown RBP3.33□□□□□ -1.88
CLIP4-209ENST00000471165 ROBO1Q9Y6N7 1651 aa3.33□□□□□ -1.88
CLIP4-209ENST00000471165 HOXA11P31270 313 aaPredicted RBP3.32□□□□□ -1.88
CLIP4-209ENST00000471165 MFAP1P55081 439 aaKnown RBP3.32□□□□□ -1.88
CLIP4-209ENST00000471165 SEC23BQ15437 767 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 ICE2Q659A1 982 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 MTHFD1LQ6UB35 978 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 BCDIN3DQ7Z5W3 292 aaKnown RBP3.32□□□□□ -1.88
CLIP4-209ENST00000471165 SFTPA1Q8IWL2 248 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 XAGE5Q8WWM1 108 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 GLG1Q92896 1179 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 RAB24Q969Q5 203 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 TMX3Q96JJ7 454 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 CCDC17Q96LX7 622 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 FEZ1Q99689 392 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 C7orf25Q9BPX7 421 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 TRPC5Q9UL62 973 aaPredicted RBP3.32□□□□□ -1.88
CLIP4-209ENST00000471165 RAD54BQ9Y620 910 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 BLMP54132 1417 aaPredicted RBP3.32□□□□□ -1.88
CLIP4-209ENST00000471165 FGD6Q6ZV73 1430 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 MED14O60244 1454 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 ABCC1P33527 1531 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 FAM135AQ9P2D6 1515 aa3.32□□□□□ -1.88
CLIP4-209ENST00000471165 STRCP1A6NGW2 1772 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 SUPT6HQ7KZ85 1726 aaKnown RBP3.31□□□□□ -1.88
CLIP4-209ENST00000471165 ZNF142P52746 1687 aaPredicted RBP3.31□□□□□ -1.88
CLIP4-209ENST00000471165 NUP153P49790 1475 aaKnown RBP3.31□□□□□ -1.88
CLIP4-209ENST00000471165 MLH3Q9UHC1 1453 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 MSH6P52701 1360 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 VPS4BO75351 444 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 TOB1P50616 345 aaPredicted RBP3.31□□□□□ -1.88
CLIP4-209ENST00000471165 PRELPP51888 382 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 KRTAP10-1P60331 282 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 TARDBPQ13148 414 aaKnown RBP eCLIP3.31□□□□□ -1.88
CLIP4-209ENST00000471165 ZNF750Q32MQ0 723 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 AWAT1Q58HT5 328 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 RHOT1Q8IXI2 618 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 TGFBRAP1Q8WUH2 860 aa3.31□□□□□ -1.88
CLIP4-209ENST00000471165 TUBB6Q9BUF5 446 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms