RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 EOGTQ5NDL2 527 aa14.78□□□□□ -0.04
SEMA3F-208ENST00000470737 SH3PXD2AQ5TCZ1 1133 aa14.78□□□□□ -0.04
SEMA3F-208ENST00000470737 TRAPPC11Q7Z392 1133 aa14.78□□□□□ -0.04
SEMA3F-208ENST00000470737 LIMS2Q7Z4I7 341 aa14.78□□□□□ -0.04
SEMA3F-208ENST00000470737 CBWD2Q8IUF1 395 aa14.78□□□□□ -0.04
SEMA3F-208ENST00000470737 PDILTQ8N807 584 aa14.78□□□□□ -0.04
SEMA3F-208ENST00000470737 MDGA1Q8NFP4 955 aa14.78□□□□□ -0.04
SEMA3F-208ENST00000470737 OR6B3Q8NGW1 331 aa14.78□□□□□ -0.04
SEMA3F-208ENST00000470737 WHAMMQ8TF30 809 aa14.78□□□□□ -0.04
SEMA3F-208ENST00000470737 PIGKQ92643 395 aa14.78□□□□□ -0.04
SEMA3F-208ENST00000470737 NUSAP1Q9BXS6 441 aaKnown RBP14.78□□□□□ -0.04
SEMA3F-208ENST00000470737 ELOVL4Q9GZR5 314 aa14.78□□□□□ -0.04
SEMA3F-208ENST00000470737 SMPD4Q9NXE4 827 aa14.78□□□□□ -0.04
SEMA3F-208ENST00000470737 LAMA1P25391 3075 aa14.77□□□□□ -0.04
SEMA3F-208ENST00000470737 ATP8B3O60423 1300 aa14.77□□□□□ -0.04
SEMA3F-208ENST00000470737 PTPRJQ12913 1337 aa14.77□□□□□ -0.04
SEMA3F-208ENST00000470737 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 KLF8O95600 359 aaPredicted RBP14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 BCKDHBP21953 392 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 TIE1P35590 1138 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 DPP6P42658 865 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 AMPD3Q01432 767 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 LMAN2Q12907 356 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 UAP1L1Q3KQV9 507 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 UNQ6494/PRO21346Q6UXR6 183 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 LPCAT2Q7L5N7 544 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 ADGRG2Q8IZP9 1017 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 PGBD3Q8N328 593 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 ALLCQ8N6M5 410 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 TXNDC5Q8NBS9 432 aaKnown RBP14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 PDZD8Q8NEN9 1154 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 MRPL45Q9BRJ2 306 aaKnown RBP14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 CFAP97Q9P2B7 532 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 TBC1D14Q9P2M4 693 aa14.77□□□□□ -0.05
SEMA3F-208ENST00000470737 PATE3B3GLJ2 98 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 GIPC1O14908 333 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 TACC1O75410 805 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 RTN3O95197 1032 aaPredicted RBP14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 KAT7O95251 611 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 FAM163BP0C2L3 166 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 ADH5P11766 374 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 CEACAM1P13688 526 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 PTPN1P18031 435 aaKnown RBP14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 CSRP1P21291 193 aaKnown RBP14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 PI4KAP42356 2102 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 ZXDBP98169 803 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 KDSRQ06136 332 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 TAF10Q12962 218 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 TRPC3Q13507 836 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 SNRNP35Q16560 246 aaKnown RBP14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 WDR72Q3MJ13 1102 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 PREPLQ4J6C6 727 aaPredicted RBP14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 BTBD8Q5XKL5 378 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 FAM173BQ6P4H8 233 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 TMEM92Q6UXU6 159 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 NUDT18Q6ZVK8 323 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 RDH13Q8NBN7 331 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 CGRRF1Q99675 332 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 RNF38Q9H0F5 515 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 TNMDQ9H2S6 317 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 ARHGEF4Q9NR80 690 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 EVLQ9UI08 416 aaPredicted RBP14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 MORC2Q9Y6X9 1032 aaPredicted RBP14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 MYO18AQ92614 2054 aaKnown RBP14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 CEP295Q9C0D2 2601 aa14.76□□□□□ -0.05
SEMA3F-208ENST00000470737 A0A087X0B3 334 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 A8MXQ7 604 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 TNFRSF10BO14763 440 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 SCAMP3O14828 347 aaKnown RBP14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 EIF3DO15371 548 aaKnown RBP eCLIP14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 OLFM2O95897 454 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 OAS1P00973 400 aaKnown RBP14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 YWHAQP27348 245 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 GRIA2P42262 883 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 TNFRSF4P43489 277 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 SLC6A11P48066 632 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 ASIC1P78348 528 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 IRX4P78413 519 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 GAD2Q05329 585 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 SLC39A14Q15043 492 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 STK38Q15208 465 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 GAB4Q2WGN9 574 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 TRIM61Q5EBN2 209 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 HSCBQ8IWL3 235 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 NUP93Q8N1F7 819 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 IL17RCQ8NAC3 791 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 OLIG1Q8TAK6 271 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 HMGB4Q8WW32 186 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 FBXO32Q969P5 355 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 USP28Q96RU2 1077 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 CUEDC2Q9H467 287 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 SLC32A1Q9H598 525 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 SH3BP1Q9Y3L3 701 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 ZFHX4Q86UP3 3567 aa14.75□□□□□ -0.05
SEMA3F-208ENST00000470737 MYH10P35580 1976 aa14.74□□□□□ -0.05
SEMA3F-208ENST00000470737 GON4LQ3T8J9 2241 aa14.74□□□□□ -0.05
SEMA3F-208ENST00000470737 ASCC3Q8N3C0 2202 aaKnown RBP14.74□□□□□ -0.05
SEMA3F-208ENST00000470737 PLXND1Q9Y4D7 1925 aa14.74□□□□□ -0.05
SEMA3F-208ENST00000470737 CFAP47Q6ZTR5 3102 aa14.74□□□□□ -0.05
SEMA3F-208ENST00000470737 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms