RNA–Protein interactions for RNA: ENST00000470386.5

GTF3C3-210, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-210ENST00000470386 RRAGBQ5VZM2 374 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 ZNF585AQ6P3V2 769 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 CD300LDQ6UXZ3 194 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 CCDC186Q7Z3E2 898 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 SERINC5Q86VE9 423 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 SESTD1Q86VW0 696 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 CIR1Q86X95 450 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 TXNDC5Q8NBS9 432 aaKnown RBP4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 SPATA20Q8TB22 786 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 TBCKQ8TEA7 893 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 GDPD5Q8WTR4 605 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 ERCC4Q92889 916 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 PAGE5Q96GU1 130 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 CDK5RAP3Q96JB5 506 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 CTAGE1Q96RT6 745 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 YME1L1Q96TA2 773 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 PCYT2Q99447 389 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 SENP7Q9BQF6 1050 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 SH2D3AQ9BRG2 576 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 IFIH1Q9BYX4 1025 aaKnown RBP4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 CCSER1Q9C0I3 900 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 LRRC27Q9C0I9 530 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 TTC12Q9H892 705 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 SPTLC3Q9NUV7 552 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 FAM86C1Q9NVL1 165 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 GABBR1Q9UBS5 961 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 TCAF1Q9Y4C2 921 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 CDY2AQ9Y6F7 541 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 TANC1Q9C0D5 1861 aa4.3□□□□□ -1.72
GTF3C3-210ENST00000470386 SZT2Q5T011 3432 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 ABHD14A-ACY1A0A1B0GW23 586 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 EPOPA6NHQ4 379 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 RRN3P2A6NIE6 340 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 KIF2AO00139 706 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 DDX3XO00571 662 aaKnown RBP eCLIP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 PSMA7O14818 248 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 MSH4O15457 936 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 BAIAP3O94812 1187 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 TDP2O95551 362 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 CCNE2O96020 404 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 CHRNA1P02708 482 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 CYP1A1P04798 512 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 TPM1P09493 284 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 IMPDH2P12268 514 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 CDK11BP21127 795 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 KLRC1P26715 233 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 CD52P31358 61 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 CA8P35219 290 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 SEPHS1P49903 392 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 UBASH3AP57075 661 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 MRPS6P82932 125 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 FANCCQ00597 558 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 SETQ01105 290 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 PAK1Q13153 545 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 PAK2Q13177 524 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 KCNB1Q14721 858 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 PPP2R5DQ14738 602 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 GPNMBQ14956 572 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 NOLC1Q14978 699 aaKnown RBP eCLIP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 NCAPHQ15003 741 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 TRIM71Q2Q1W2 868 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 FILIP1LQ4L180 1135 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 PAN2Q504Q3 1202 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 ZNF658Q5TYW1 1059 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 LRCH2Q5VUJ6 765 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 KRT79Q5XKE5 535 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 HAUS3Q68CZ6 603 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 ISM2Q6H9L7 571 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 PPP4R3AQ6IN85 833 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 MTHFD1LQ6UB35 978 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 MOXD1Q6UVY6 613 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 MIER3Q7Z3K6 550 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 FILIP1Q7Z7B0 1213 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 DCP2Q8IU60 420 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 VSTM4Q8IW00 320 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 CCDC60Q8IWA6 550 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 LRRC8AQ8IWT6 810 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 USP38Q8NB14 1042 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 RNF169Q8NCN4 708 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 PHOSPHO2Q8TCD6 241 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 KIAA1524Q8TCG1 905 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 EPSTI1Q96J88 318 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 C17orf80Q9BSJ5 609 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 TEKT3Q9BXF9 490 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 XPO4Q9C0E2 1151 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 NT5C3AQ9H0P0 336 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 TBC1D22BQ9NU19 505 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 IFNKQ9P0W0 207 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 GULP1Q9UBP9 304 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 DDX25Q9UHL0 483 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 AKT3Q9Y243 479 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 NFE2L3Q9Y4A8 694 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 DNAH12Q6ZR08 3092 aa4.29□□□□□ -1.72
GTF3C3-210ENST00000470386 NFASCO94856 1347 aa4.28□□□□□ -1.72
GTF3C3-210ENST00000470386 IGLV3-22A0A075B6J6 115 aa4.28□□□□□ -1.72
GTF3C3-210ENST00000470386 TRBV23OR9-2A0A075B6M9 112 aa4.28□□□□□ -1.72
GTF3C3-210ENST00000470386 A0A087WWV3 80 aa4.28□□□□□ -1.72
GTF3C3-210ENST00000470386 A0A087X0B3 334 aa4.28□□□□□ -1.72
GTF3C3-210ENST00000470386 BICDL2A1A5D9 508 aa4.28□□□□□ -1.72
GTF3C3-210ENST00000470386 DENND3A2RUS2 1198 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms