RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ADORA2BP29275 332 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 PDE6CP51160 858 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 MAP3K7CLP57077 242 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 PLCB2Q00722 1185 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 CETN1Q12798 172 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 DPCR1Q3MIW9 517 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 ZNF394Q53GI3 561 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 PPP1R26Q5T8A7 1209 aaPredicted RBP14.98□□□□□ -0.01
TOP3B-215ENST00000470338 SNX30Q5VWJ9 437 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 CLEC20AQ6ZU45 233 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 TPRG1Q6ZUI0 275 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 IRF2BP1Q8IU81 584 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 ARL14EPQ8N8R7 260 aaPredicted RBP14.98□□□□□ -0.01
TOP3B-215ENST00000470338 EHBP1Q8NDI1 1231 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 SCAMP5Q8TAC9 235 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 HEXIM2Q96MH2 286 aaKnown RBP14.98□□□□□ -0.01
TOP3B-215ENST00000470338 SLITRK1Q96PX8 696 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 NELL2Q99435 816 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 FAM83CQ9BQN1 747 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 FOXQ1Q9C009 403 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 TRPC7Q9HCX4 862 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 THG1LQ9NWX6 298 aaKnown RBP14.98□□□□□ -0.01
TOP3B-215ENST00000470338 CACNA1IQ9P0X4 2223 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 CACNA1HO95180 2353 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 HHLA1C9JL84 531 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 MAN2B1O00754 1011 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 OLFM2O95897 454 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 AFPP02771 609 aaKnown RBP14.97□□□□□ -0.01
TOP3B-215ENST00000470338 ZDHHC11BP0C7U3 371 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 TCF3P15923 654 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 CD72P21854 359 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 ERCC5P28715 1186 aaPredicted RBP14.97□□□□□ -0.01
TOP3B-215ENST00000470338 SLC5A3P53794 718 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 YWHAEP62258 255 aaKnown RBP14.97□□□□□ -0.01
TOP3B-215ENST00000470338 TCF15Q12870 199 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 LRMPQ12912 555 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 CT47A1Q5JQC4 288 aaPredicted RBP14.97□□□□□ -0.01
TOP3B-215ENST00000470338 ARHGAP17Q68EM7 881 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 ZNF852Q6ZMS4 543 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 RBM43Q6ZSC3 357 aaKnown RBP14.97□□□□□ -0.01
TOP3B-215ENST00000470338 CCDC105Q8IYK2 499 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 ZNF687Q8N1G0 1237 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 PDZD8Q8NEN9 1154 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 RIN3Q8TB24 985 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 CSGALNACT1Q8TDX6 532 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 ZFYVE19Q96K21 471 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 NT5C1BQ96P26 610 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 DUSP16Q9BY84 665 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 RNF38Q9H0F5 515 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 PNPLA8Q9NP80 782 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 LTB4R2Q9NPC1 389 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 GKN1Q9NS71 199 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 ARHGAP26Q9UNA1 814 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 MTF2Q9Y483 593 aaPredicted RBP14.97□□□□□ -0.01
TOP3B-215ENST00000470338 PIAS3Q9Y6X2 628 aa14.97□□□□□ -0.01
TOP3B-215ENST00000470338 FAM170BA6NMN3 283 aa14.96□□□□□ -0.01
TOP3B-215ENST00000470338 OAS1P00973 400 aaKnown RBP14.96□□□□□ -0.01
TOP3B-215ENST00000470338 CKMP06732 381 aa14.96□□□□□ -0.01
TOP3B-215ENST00000470338 DCNP07585 359 aaKnown RBP14.96□□□□□ -0.01
TOP3B-215ENST00000470338 PTPN5P54829 565 aa14.96□□□□□ -0.01
TOP3B-215ENST00000470338 SLC7A9P82251 487 aa14.96□□□□□ -0.01
TOP3B-215ENST00000470338 IFRD2Q12894 506 aaPredicted RBP14.96□□□□□ -0.01
TOP3B-215ENST00000470338 FZD5Q13467 585 aa14.96□□□□□ -0.01
TOP3B-215ENST00000470338 ZNF77Q15935 545 aa14.96□□□□□ -0.01
TOP3B-215ENST00000470338 DTWD2Q8NBA8 298 aa14.96□□□□□ -0.01
TOP3B-215ENST00000470338 FBXO32Q969P5 355 aa14.96□□□□□ -0.01
TOP3B-215ENST00000470338 CLDN23Q96B33 292 aa14.96□□□□□ -0.01
TOP3B-215ENST00000470338 MSANTD3Q96H12 275 aa14.96□□□□□ -0.01
TOP3B-215ENST00000470338 CNOT6LQ96LI5 555 aaKnown RBP14.96□□□□□ -0.01
TOP3B-215ENST00000470338 FBXO44Q9H4M3 255 aa14.96□□□□□ -0.01
TOP3B-215ENST00000470338 C8orf33Q9H7E9 229 aaPredicted RBP14.96□□□□□ -0.01
TOP3B-215ENST00000470338 CHORDC1Q9UHD1 332 aaPredicted RBP14.96□□□□□ -0.01
TOP3B-215ENST00000470338 DACH1Q9UI36 760 aa14.96□□□□□ -0.01
TOP3B-215ENST00000470338 MRPS17Q9Y2R5 130 aaKnown RBP14.96□□□□□ -0.01
TOP3B-215ENST00000470338 ACO1P21399 889 aaKnown RBP14.95□□□□□ -0.02
TOP3B-215ENST00000470338 TARSP26639 723 aaKnown RBP14.95□□□□□ -0.02
TOP3B-215ENST00000470338 PLA2G5P39877 138 aa14.95□□□□□ -0.02
TOP3B-215ENST00000470338 ZXDBP98169 803 aa14.95□□□□□ -0.02
TOP3B-215ENST00000470338 GCNT1Q02742 428 aa14.95□□□□□ -0.02
TOP3B-215ENST00000470338 USP4Q13107 963 aa14.95□□□□□ -0.02
TOP3B-215ENST00000470338 UBXN2BQ14CS0 331 aa14.95□□□□□ -0.02
TOP3B-215ENST00000470338 GPRIN1Q7Z2K8 1008 aa14.95□□□□□ -0.02
TOP3B-215ENST00000470338 UBXN6Q9BZV1 441 aa14.95□□□□□ -0.02
TOP3B-215ENST00000470338 THAP9Q9H5L6 903 aa14.95□□□□□ -0.02
TOP3B-215ENST00000470338 GTSE1Q9NYZ3 720 aa14.95□□□□□ -0.02
TOP3B-215ENST00000470338 KIAA1257Q9ULG3 409 aa14.95□□□□□ -0.02
TOP3B-215ENST00000470338 SCML2Q9UQR0 700 aa14.95□□□□□ -0.02
TOP3B-215ENST00000470338 MYOFQ9NZM1 2061 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 NCAM2O15394 837 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 ABL1P00519 1130 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 TUBP50607 506 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 KIF11P52732 1056 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 NHLH1Q02575 133 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 TNK2Q07912 1038 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 RUNX3Q13761 415 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 MTF1Q14872 753 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 TPD52L1Q16890 204 aaPredicted RBP14.94□□□□□ -0.02
TOP3B-215ENST00000470338 ITPRIPL2Q3MIP1 535 aa14.94□□□□□ -0.02
TOP3B-215ENST00000470338 CC2D1AQ6P1N0 951 aaPredicted RBP14.94□□□□□ -0.02
TOP3B-215ENST00000470338 C1orf228Q6PIY5 440 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms