RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 DAB2IPQ5VWQ8 1189 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 TRMT10CQ7L0Y3 403 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 DNAAF5Q86Y56 855 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 TBCBQ99426 244 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 ACP6Q9NPH0 428 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 HACD3Q9P035 362 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 WHRNQ9P202 907 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 GYG2O15488 501 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 DAPK3O43293 454 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 CA12O43570 354 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 MDH1P40925 334 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 MSH2P43246 934 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 PEX5P50542 639 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 WDR75Q8IWA0 830 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 USP6NLQ92738 828 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 PGBD4Q96DM1 585 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 XAB2Q9HCS7 855 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 PTPRJQ12913 1337 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 MBLAC1A4D2B0 266 aaPredicted RBP7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 RPS6KA5O75582 802 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 RPSAP08865 295 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 FBXO47Q5MNV8 452 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 TRIML2Q8N7C3 387 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 TRAIPQ9BWF2 469 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 KATNBL1Q9H079 304 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 MINDY3Q9H8M7 445 aa7.3□□□□□ -1.24
GAPVD1-215ENST00000470056 SIGLEC16A6NMB1 481 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 FAM189A1O60320 539 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 FAM102AQ5T9C2 384 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 NUGGCQ68CJ6 796 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 TBC1D1Q86TI0 1168 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 RIBC1Q8N443 379 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 MGARPQ8TDB4 240 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 HDAC7Q8WUI4 952 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 UBN1Q9NPG3 1134 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 ZNF148Q9UQR1 794 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 EFR3BQ9Y2G0 817 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 TMEM191CA6NGB0 347 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 KRT81Q14533 505 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 CYP1B1Q16678 543 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 FAM133BQ5BKY9 247 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 C17orf99Q6UX52 265 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 SLCO2A1Q92959 643 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 NUDCD1Q96RS6 583 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 ARHGAP26Q9UNA1 814 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 SNX24Q9Y343 169 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 ERBB2P04626 1255 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 GJB1P08034 283 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 PYGMP11217 842 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 KCNA4P22459 653 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 AMHR2Q16671 573 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 METTL23Q86XA0 190 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 NIPA2Q8N8Q9 360 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 CYLDQ9NQC7 956 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 NOVA2Q9UNW9 492 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 MCF2LO15068 1137 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 CST3P01034 146 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 NEK2P51955 445 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 INCA1Q0VD86 236 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 SNX17Q15036 470 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 KCTD6Q8NC69 237 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 KRT35Q92764 455 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 CD101Q93033 1021 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 CELF4Q9BZC1 486 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 RSAD1Q9HA92 442 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 ANAPC5Q9UJX4 755 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 GNEQ9Y223 722 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 UMODL1Q5DID0 1318 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 A0A1B0GW55 424 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 DUX4L2P0CJ85 424 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 DUX4L3P0CJ86 424 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 DUX4L4P0CJ87 422 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 DUX4L5P0CJ88 424 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 DUX4L6P0CJ89 424 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 DUX4L7P0CJ90 424 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 ITGA4P13612 1032 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 GPD1P21695 349 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 PMS2P54278 862 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 GSCP56915 257 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 MRPS6P82932 125 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 SWT1Q5T5J6 900 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 CCT8L2Q96SF2 557 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 PRDM16Q9HAZ2 1276 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 CHCHD3Q9NX63 227 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 DUX4Q9UBX2 424 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 HAUS5O94927 633 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 ZNF865P0CJ78 1059 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 CA4P22748 312 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 ARL1P40616 181 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 KRT17Q04695 432 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 TMED1Q13445 227 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 KRR1Q13601 381 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 RPS6KA2Q15349 733 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 SLC10A6Q3KNW5 377 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 BOLA3Q53S33 107 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 DNAJB3Q8WWF6 145 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 HHIPL1Q96JK4 782 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 TRIM62Q9BVG3 475 aa7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 ROPN1BQ9BZX4 212 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-215ENST00000470056 ROPN1Q9HAT0 212 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms