RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 CEP135Q66GS9 1140 aa14.37□□□□□ -0.11
EFNA1-203ENST00000469878 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.37□□□□□ -0.11
EFNA1-203ENST00000469878 FILIP1Q7Z7B0 1213 aa14.37□□□□□ -0.11
EFNA1-203ENST00000469878 WDR5BQ86VZ2 330 aa14.37□□□□□ -0.11
EFNA1-203ENST00000469878 SFTPA1Q8IWL2 248 aa14.37□□□□□ -0.11
EFNA1-203ENST00000469878 FAM160A2Q8N612 972 aaPredicted RBP14.37□□□□□ -0.11
EFNA1-203ENST00000469878 RPLP0P6Q8NHW5 317 aa14.37□□□□□ -0.11
EFNA1-203ENST00000469878 SCAMP5Q8TAC9 235 aa14.37□□□□□ -0.11
EFNA1-203ENST00000469878 GOLGA5Q8TBA6 731 aa14.37□□□□□ -0.11
EFNA1-203ENST00000469878 ATP2A3Q93084 1043 aa14.37□□□□□ -0.11
EFNA1-203ENST00000469878 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
EFNA1-203ENST00000469878 ELOVL4Q9GZR5 314 aa14.37□□□□□ -0.11
EFNA1-203ENST00000469878 VRTNQ9H8Y1 702 aa14.37□□□□□ -0.11
EFNA1-203ENST00000469878 GDPD2Q9HCC8 539 aa14.37□□□□□ -0.11
EFNA1-203ENST00000469878 RAB23Q9ULC3 237 aa14.37□□□□□ -0.11
EFNA1-203ENST00000469878 BEST1O76090 585 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 CYP17A1P05093 508 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 TRIM49P0CI25 452 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 TRIM49CP0CI26 452 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 TCF3P15923 654 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 OPRD1P41143 372 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 ASPAP45381 313 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 PGFP49763 221 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 KRT85P78386 507 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 FOXK2Q01167 660 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 DPYDQ12882 1025 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 PUM1Q14671 1186 aaKnown RBP eCLIP14.36□□□□□ -0.11
EFNA1-203ENST00000469878 CCDC6Q16204 474 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 ZACNQ401N2 412 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 ACOT1Q86TX2 421 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 SLC9A9Q8IVB4 645 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 FUKQ8N0W3 1084 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 ZMIZ2Q8NF64 920 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 CD101Q93033 1021 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 SECISBP2LQ93073 1101 aaKnown RBP14.36□□□□□ -0.11
EFNA1-203ENST00000469878 TWNKQ96RR1 684 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 MED10Q9BTT4 135 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 KRT82Q9NSB4 513 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 MYH10P35580 1976 aa14.36□□□□□ -0.11
EFNA1-203ENST00000469878 SPAG17Q6Q759 2223 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 SDK1Q7Z5N4 2213 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 FAM237AA0A1B0GTK4 181 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 PDXKO00764 312 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 DRD1P21728 446 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 HOXA6P31267 233 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 SYKP43405 635 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 ATXN1P54253 815 aaKnown RBP14.35□□□□□ -0.11
EFNA1-203ENST00000469878 SEC13P55735 322 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 SLC7A9P82251 487 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 PSMD2Q13200 908 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 CEP68Q76N32 757 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 SV2AQ7L0J3 742 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 KBTBD6Q86V97 674 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 C12orf40Q86WS4 652 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 SMYD4Q8IYR2 804 aaPredicted RBP14.35□□□□□ -0.11
EFNA1-203ENST00000469878 FBXO32Q969P5 355 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 WBP2Q969T9 261 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 CEP295NLQ96MC4 621 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 SMOQ99835 787 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 SEMA4GQ9NTN9 838 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 FAM49BQ9NUQ9 324 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 CFAP97Q9P2B7 532 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 CHORDC1Q9UHD1 332 aaPredicted RBP14.35□□□□□ -0.11
EFNA1-203ENST00000469878 SLC8A2Q9UPR5 921 aa14.35□□□□□ -0.11
EFNA1-203ENST00000469878 DCDC2BA2VCK2 349 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 TNFRSF10BO14763 440 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 COCHO43405 550 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 GDF9O60383 454 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 AKAP3O75969 853 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 NFATC1O95644 943 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 HLA-DRAP01903 254 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 RETP07949 1114 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 FAM163BP0C2L3 166 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 MBL2P11226 248 aaPredicted RBP14.34□□□□□ -0.11
EFNA1-203ENST00000469878 YWHAQP27348 245 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 SLC6A11P48066 632 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 NDST1P52848 882 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 SLC5A3P53794 718 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 LMNB2Q03252 620 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 PPP3CAQ08209 521 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 GPRIN1Q7Z2K8 1008 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 NUP93Q8N1F7 819 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 C12orf29Q8N999 325 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 SLC2A14Q8TDB8 520 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 TMEM174Q8WUU8 243 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 GAB3Q8WWW8 586 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 ZFRQ96KR1 1074 aaKnown RBP14.34□□□□□ -0.11
EFNA1-203ENST00000469878 SLITRK1Q96PX8 696 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 CCSER2Q9H7U1 834 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 MMRN2Q9H8L6 949 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 APOBEC3GQ9HC16 384 aaKnown RBP14.34□□□□□ -0.11
EFNA1-203ENST00000469878 GMIPQ9P107 970 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 USP25Q9UHP3 1055 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 TRAF3IP3Q9Y228 551 aa14.34□□□□□ -0.11
EFNA1-203ENST00000469878 NCOR2Q9Y618 2525 aa14.33□□□□□ -0.12
EFNA1-203ENST00000469878 K7EQS6 105 aa14.33□□□□□ -0.12
EFNA1-203ENST00000469878 DCLK1O15075 740 aa14.33□□□□□ -0.12
EFNA1-203ENST00000469878 AXIN1O15169 862 aa14.33□□□□□ -0.12
EFNA1-203ENST00000469878 RPP40O75818 363 aaKnown RBP14.33□□□□□ -0.12
EFNA1-203ENST00000469878 AP1G2O75843 785 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms