RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 A0A1B0GUA9 196 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 MCF2LO15068 1137 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 HCRTO43612 131 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 P4HA1P13674 534 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 ARL4CP56559 192 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 RBP5P82980 135 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 IL9RQ01113 521 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 DPYSL3Q14195 570 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 MTFR1Q15390 333 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 KIZQ2M2Z5 673 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 BBS9Q3SYG4 887 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 EFHC2Q5JST6 749 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 PMF1Q6P1K2 205 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 LCLAT1Q6UWP7 414 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 C3orf62Q6ZUJ4 267 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 PCGF5Q86SE9 256 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 IGDCC3Q8IVU1 814 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 FITM2Q8N6M3 262 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 ANKLE1Q8NAG6 615 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 SGSM3Q96HU1 749 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 FAXDC2Q96IV6 333 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 FAM49BQ9NUQ9 324 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 ASNSD1Q9NWL6 643 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.35■□□□□ 0.05
CBWD3-205ENST00000469687 XPO7Q9UIA9 1087 aaKnown RBP15.35■□□□□ 0.05
CBWD3-205ENST00000469687 ITGA11Q9UKX5 1188 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 C2CD2Q9Y426 696 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 HES2Q9Y543 173 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 PRPF4O43172 522 aaKnown RBP eCLIP15.35■□□□□ 0.05
CBWD3-205ENST00000469687 ENDOD1O94919 500 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 SNAI1O95863 264 aaPredicted RBP15.35■□□□□ 0.05
CBWD3-205ENST00000469687 GSTA1P08263 222 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 FGFR1P11362 822 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 PCK1P35558 622 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 GEMIN4P57678 1058 aaKnown RBP15.35■□□□□ 0.05
CBWD3-205ENST00000469687 GRIK4Q16099 956 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 ZC3H12AQ5D1E8 599 aaKnown RBP15.35■□□□□ 0.05
CBWD3-205ENST00000469687 C1orf228Q6PIY5 440 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 ACOT1Q86TX2 421 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 FAM228AQ86W67 206 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 TTC30AQ86WT1 665 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 GPRC5AQ8NFJ5 357 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 FBF1Q8TES7 1133 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 SMC6Q96SB8 1091 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 CNPY3Q9BT09 278 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 NT5C1AQ9BXI3 368 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 RSAD1Q9HA92 442 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 PSMC3IPQ9P2W1 217 aaPredicted RBP15.35■□□□□ 0.05
CBWD3-205ENST00000469687 ZMYND8Q9ULU4 1186 aaPredicted RBP15.35■□□□□ 0.05
CBWD3-205ENST00000469687 CHMP2BQ9UQN3 213 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 ARL2BPQ9Y2Y0 163 aa15.35■□□□□ 0.05
CBWD3-205ENST00000469687 E7ESA3 106 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 CA4P22748 312 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 NCALDP61601 193 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 NR1H3Q13133 447 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 SNAPC2Q13487 334 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 GALNTL6Q49A17 601 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 CCDC14Q49A88 953 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 GLRA4Q5JXX5 417 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 C9orf131Q5VYM1 1079 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 TBC1D1Q86TI0 1168 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-205ENST00000469687 PARP9Q8IXQ6 854 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 B3GNT5Q9BYG0 378 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 FRMD8P1Q9BZ68 369 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-205ENST00000469687 PITPNM3Q9BZ71 974 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 C12orf65Q9H3J6 166 aaKnown RBP15.34■□□□□ 0.05
CBWD3-205ENST00000469687 GBA2Q9HCG7 927 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-205ENST00000469687 SNTG2Q9NY99 539 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 TUBGCP4Q9UGJ1 667 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 GJD2Q9UKL4 321 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 SNX9Q9Y5X1 595 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 ADCY6O43306 1168 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 TYROBPO43914 113 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 GABBR2O75899 941 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 ECM2O94769 699 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-205ENST00000469687 NPTXRO95502 500 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 KRT4P19013 534 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 TFE3P19532 575 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-205ENST00000469687 IL4RP24394 825 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 GCLCP48506 637 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-205ENST00000469687 ELF3P78545 371 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-205ENST00000469687 ROR1Q01973 937 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 ACAP1Q15027 740 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 NOMO1Q15155 1222 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 CA9Q16790 459 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 SCYL2Q6P3W7 929 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 DARS2Q6PI48 645 aaKnown RBP15.34■□□□□ 0.05
CBWD3-205ENST00000469687 ECHDC2Q86YB7 292 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 SCUBE3Q8IX30 993 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 ATP11CQ8NB49 1132 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 PAFAH2Q99487 392 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 KLF6Q99612 283 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-205ENST00000469687 EIF2AQ9BY44 585 aaKnown RBP15.34■□□□□ 0.05
CBWD3-205ENST00000469687 CDHR5Q9HBB8 845 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 VTA1Q9NP79 307 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 NGRNQ9NPE2 291 aaKnown RBP15.34■□□□□ 0.05
CBWD3-205ENST00000469687 SLC24A2Q9UI40 661 aa15.34■□□□□ 0.05
CBWD3-205ENST00000469687 LOC102724159A0A0B4J2E5 919 aa15.33■□□□□ 0.04
CBWD3-205ENST00000469687 GOLGA8RI6L899 631 aa15.33■□□□□ 0.04
CBWD3-205ENST00000469687 AVILO75366 819 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms