RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 EPHB1P54762 984 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 ALDH18A1P54886 795 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 SLC25A3Q00325 362 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 TFAP4Q01664 338 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 STX3Q13277 289 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 PSMD6Q15008 389 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 PHKG1Q16816 387 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 ANKDD1AQ495B1 522 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 ZBED5Q49AG3 693 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 HSF5Q4G112 596 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 SAPCD2Q86UD0 394 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 ARID3BQ8IVW6 561 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 TRUB1Q8WWH5 349 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 DLG3Q92796 817 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 ISOC1Q96CN7 298 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 CMTM5Q96DZ9 223 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 THAP11Q96EK4 314 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 FAM111AQ96PZ2 611 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 ZNF341Q9BYN7 854 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 GCOM2Q9BZD3 368 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 CLK4Q9HAZ1 481 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 OLFML3Q9NRN5 406 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 PNPLA3Q9NST1 481 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 MKS1Q9NXB0 559 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 KLHL3Q9UH77 587 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 RIMS3Q9UJD0 308 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 ZNF652Q9Y2D9 606 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 MYRFQ9Y2G1 1151 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 SLX4Q8IY92 1834 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 E5RJQ4 531 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 H3BNH8 94 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 MARCH6O60337 910 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 DGKIO75912 1065 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 FBXO21O94952 628 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 CCDC130P13994 396 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 CA8P35219 290 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 STAT2P52630 851 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 AQP5P55064 265 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 GPX6P59796 221 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 CACNB1Q02641 598 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 CYP4A11Q02928 519 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 CETN1Q12798 172 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 DPYSQ14117 519 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 FASTKD3Q14CZ7 662 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 DCAF6Q58WW2 860 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 RNASEH2BQ5TBB1 312 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 FASTKD5Q7L8L6 764 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 KCTD17Q8N5Z5 321 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 PTCD2Q8WV60 388 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 HAS1Q92839 578 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 E2F7Q96AV8 911 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 RILPQ96NA2 401 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 ACAP3Q96P50 834 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 SERPINI1Q99574 410 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 DOK1Q99704 481 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 AVENQ9NQS1 362 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 TMEM260Q9NX78 707 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 NCKIPSDQ9NZQ3 722 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 NOCTQ9UK39 431 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 PTBP2Q9UKA9 531 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 PRPF19Q9UMS4 504 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 ERVK-11Q9UQG0 969 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 AP4S1Q9Y587 144 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 PCDHB2Q9Y5E7 798 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 NOX1Q9Y5S8 564 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 SLC30A1Q9Y6M5 507 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 CLUHO75153 1309 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 POTEB3A0JP26 581 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 DENND3A2RUS2 1198 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 ALOX5P09917 674 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 TFPTP0C1Z6 253 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 MAPK4P31152 587 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 TMPRSS15P98073 1019 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 ACAP1Q15027 740 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 EFTUD2Q15029 972 aaKnown RBP eCLIP9.37□□□□□ -0.911e-6■■■■□ 25.2
SMARCE1-207ENST00000469334 HIF1AQ16665 826 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 TEX44Q53QW1 395 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 TMEM214Q6NUQ4 689 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 POTEBQ6S5H4 581 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 ARCQ7LC44 396 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 TBC1D15Q8TC07 691 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 ADAMTS16Q8TE57 1224 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 EPS8L1Q8TE68 723 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 TRIM11Q96F44 468 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 BTBD6Q96KE9 485 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 PCDHB18PQ96TA0 734 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 OSBPL11Q9BXB4 747 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 IMPG2Q9BZV3 1241 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 CD209Q9NNX6 404 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 ALG13Q9NP73 1137 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 MAN1C1Q9NR34 630 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 SIRPGQ9P1W8 387 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 SEPT3Q9UH03 358 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 SLC8A2Q9UPR5 921 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 ERGIC3Q9Y282 383 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 DRG1Q9Y295 367 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 FRMD4BQ9Y2L6 1034 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 TIMM22Q9Y584 194 aa9.37□□□□□ -0.91
SMARCE1-207ENST00000469334 A0A087WXM4 84 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms