RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 AP1G2O75843 785 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 CHRNB1P11230 501 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 CCDC130P13994 396 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 TCF3P15923 654 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 CD44P16070 742 aaKnown RBP18.14■□□□□ 0.49
SSBP1-207ENST00000468267 YWHAQP27348 245 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 MXI1P50539 228 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 MTAPQ13126 283 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 RUNX3Q13761 415 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 ZNF77Q15935 545 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 ZNF528Q3MIS6 628 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 TXNDC11Q6PKC3 985 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 MAMSTRQ6ZN01 415 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 C12orf29Q8N999 325 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 SLC2A14Q8TDB8 520 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 FAXDC2Q96IV6 333 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 SLITRK1Q96PX8 696 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 EBF3Q9H4W6 596 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 KRT82Q9NSB4 513 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 RAB20Q9NX57 234 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 IL37Q9NZH6 218 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 CHMP5Q9NZZ3 219 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 ARHGAP26Q9UNA1 814 aa18.14■□□□□ 0.49
SSBP1-207ENST00000468267 ATG2BQ96BY7 2078 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 SPTBN4Q9H254 2564 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 TRIM21P19474 475 aaKnown RBP18.13■□□□□ 0.49
SSBP1-207ENST00000468267 BMP6P22004 513 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 PPP1R2P41236 205 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 USP4Q13107 963 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 MORC3Q14149 939 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 MTF1Q14872 753 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 PDGFRLQ15198 375 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 TRIM68Q6AZZ1 485 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 SCAMP5Q8TAC9 235 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 SH3RF2Q8TEC5 729 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 WHAMMQ8TF30 809 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 OVCA2Q8WZ82 227 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 NKD2Q969F2 451 aaPredicted RBP18.13■□□□□ 0.49
SSBP1-207ENST00000468267 TWNKQ96RR1 684 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 SMOQ99835 787 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 IER2Q9BTL4 223 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 NT5C1AQ9BXI3 368 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 CSNK1G1Q9HCP0 422 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 COMMD8Q9NX08 183 aa18.13■□□□□ 0.49
SSBP1-207ENST00000468267 ARMCX3Q9UH62 379 aaPredicted RBP18.13■□□□□ 0.49
SSBP1-207ENST00000468267 PRR23AA6NEV1 266 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 OTOL1A6NHN0 477 aaPredicted RBP18.12■□□□□ 0.49
SSBP1-207ENST00000468267 PPP1R3GB7ZBB8 358 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 CILPO75339 1184 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 ABL1P00519 1130 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 ARSAP15289 507 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 CD58P19256 250 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 SLC7A9P82251 487 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 CSTF1Q05048 431 aaKnown RBP18.12■□□□□ 0.49
SSBP1-207ENST00000468267 IFRD2Q12894 506 aaPredicted RBP18.12■□□□□ 0.49
SSBP1-207ENST00000468267 LRRC32Q14392 662 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 PON2Q15165 354 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 DCAF17Q5H9S7 520 aaPredicted RBP18.12■□□□□ 0.49
SSBP1-207ENST00000468267 WDR44Q5JSH3 913 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 DGKKQ5KSL6 1271 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 TCERG1LQ5VWI1 586 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 ASCL5Q7RTU5 278 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 PDZD8Q8NEN9 1154 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 ZMIZ2Q8NF64 920 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 OSCP1Q8WVF1 389 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 FBXO32Q969P5 355 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 HNRNPABQ99729 332 aaKnown RBP18.12■□□□□ 0.49
SSBP1-207ENST00000468267 DUSP9Q99956 384 aaKnown RBP18.12■□□□□ 0.49
SSBP1-207ENST00000468267 RNF38Q9H0F5 515 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 SEMA4AQ9H3S1 761 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 PRMT8Q9NR22 394 aaPredicted RBP18.12■□□□□ 0.49
SSBP1-207ENST00000468267 FAM49BQ9NUQ9 324 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 DUS2Q9NX74 493 aaKnown RBP18.12■□□□□ 0.49
SSBP1-207ENST00000468267 COQ4Q9Y3A0 265 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 R4GN57 208 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 OTOGLQ3ZCN5 2332 aa18.12■□□□□ 0.49
SSBP1-207ENST00000468267 GPR179Q6PRD1 2367 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 FAM92AA1XBS5 289 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 BEST1O76090 585 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 OLFM2O95897 454 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 OAS1P00973 400 aaKnown RBP18.11■□□□□ 0.49
SSBP1-207ENST00000468267 SLC5A3P53794 718 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 MAP3K7CLP57077 242 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 UBE2HP62256 183 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 ZXDBP98169 803 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 CBWD6Q4V339 395 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 CBWD3Q5JTY5 395 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 CBWD5Q5RIA9 395 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 SNX30Q5VWJ9 437 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 FOXR2Q6PJQ5 311 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 ZC3H14Q6PJT7 736 aaKnown RBP18.11■□□□□ 0.49
SSBP1-207ENST00000468267 FILIP1Q7Z7B0 1213 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 TTC39CQ8N584 583 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 TTC16Q8NEE8 873 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 TATDN2Q93075 761 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 SLC35C1Q96A29 364 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 CYFIP2Q96F07 1278 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 CEP63Q96MT8 703 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 DNAI2Q9GZS0 605 aa18.11■□□□□ 0.49
SSBP1-207ENST00000468267 CHORDC1Q9UHD1 332 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms