RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 RPLP0P6Q8NHW5 317 aa26.06■■□□□ 1.76
PTCH1-210ENST00000468211 HHIPQ96QV1 700 aa26.06■■□□□ 1.76
PTCH1-210ENST00000468211 ELOVL4Q9GZR5 314 aa26.06■■□□□ 1.76
PTCH1-210ENST00000468211 VRTNQ9H8Y1 702 aa26.06■■□□□ 1.76
PTCH1-210ENST00000468211 EXOC1Q9NV70 894 aa26.06■■□□□ 1.76
PTCH1-210ENST00000468211 DCDC2BA2VCK2 349 aa26.05■■□□□ 1.76
PTCH1-210ENST00000468211 LRP3O75074 770 aa26.05■■□□□ 1.76
PTCH1-210ENST00000468211 OLFM2O95897 454 aa26.05■■□□□ 1.76
PTCH1-210ENST00000468211 ABL1P00519 1130 aa26.05■■□□□ 1.76
PTCH1-210ENST00000468211 SLC7A9P82251 487 aa26.05■■□□□ 1.76
PTCH1-210ENST00000468211 ZNF699Q32M78 642 aa26.05■■□□□ 1.76
PTCH1-210ENST00000468211 SCARA5Q6ZMJ2 495 aa26.05■■□□□ 1.76
PTCH1-210ENST00000468211 PAQR9Q6ZVX9 377 aa26.05■■□□□ 1.76
PTCH1-210ENST00000468211 GOLGA5Q8TBA6 731 aa26.05■■□□□ 1.76
PTCH1-210ENST00000468211 GAB3Q8WWW8 586 aa26.05■■□□□ 1.76
PTCH1-210ENST00000468211 KCNK16Q96T55 309 aa26.05■■□□□ 1.76
PTCH1-210ENST00000468211 SMPD4Q9NXE4 827 aa26.05■■□□□ 1.76
PTCH1-210ENST00000468211 ZDHHC9Q9Y397 364 aa26.05■■□□□ 1.76
PTCH1-210ENST00000468211 OAS1P00973 400 aaKnown RBP26.04■■□□□ 1.76
PTCH1-210ENST00000468211 PFKLP17858 780 aa26.04■■□□□ 1.76
PTCH1-210ENST00000468211 SDHBP21912 280 aa26.04■■□□□ 1.76
PTCH1-210ENST00000468211 OPRD1P41143 372 aa26.04■■□□□ 1.76
PTCH1-210ENST00000468211 PDE6CP51160 858 aa26.04■■□□□ 1.76
PTCH1-210ENST00000468211 NCOA4Q13772 614 aa26.04■■□□□ 1.76
PTCH1-210ENST00000468211 CSRP2Q16527 193 aa26.04■■□□□ 1.76
PTCH1-210ENST00000468211 KBTBD6Q86V97 674 aa26.04■■□□□ 1.76
PTCH1-210ENST00000468211 SLC9A9Q8IVB4 645 aa26.04■■□□□ 1.76
PTCH1-210ENST00000468211 HPSEQ9Y251 543 aa26.04■■□□□ 1.76
PTCH1-210ENST00000468211 CPQQ9Y646 472 aa26.04■■□□□ 1.76
PTCH1-210ENST00000468211 CCDC163A0A0D9SF12 145 aa26.03■■□□□ 1.76
PTCH1-210ENST00000468211 GDF9O60383 454 aa26.03■■□□□ 1.76
PTCH1-210ENST00000468211 RPP40O75818 363 aaKnown RBP26.03■■□□□ 1.76
PTCH1-210ENST00000468211 CMA1P23946 247 aa26.03■■□□□ 1.76
PTCH1-210ENST00000468211 FBXO43Q4G163 708 aa26.03■■□□□ 1.76
PTCH1-210ENST00000468211 ZNF667Q5HYK9 610 aa26.03■■□□□ 1.76
PTCH1-210ENST00000468211 PRR23CQ6ZRP0 262 aa26.03■■□□□ 1.76
PTCH1-210ENST00000468211 FILIP1Q7Z7B0 1213 aa26.03■■□□□ 1.76
PTCH1-210ENST00000468211 TMEM174Q8WUU8 243 aa26.03■■□□□ 1.76
PTCH1-210ENST00000468211 EHD2Q9NZN4 543 aa26.03■■□□□ 1.76
PTCH1-210ENST00000468211 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.02■■□□□ 1.76
PTCH1-210ENST00000468211 AXIN1O15169 862 aa26.02■■□□□ 1.76
PTCH1-210ENST00000468211 NFATC1O95644 943 aa26.02■■□□□ 1.76
PTCH1-210ENST00000468211 NR3C1P04150 777 aa26.02■■□□□ 1.76
PTCH1-210ENST00000468211 CYP17A1P05093 508 aa26.02■■□□□ 1.76
PTCH1-210ENST00000468211 PPP3CCP48454 512 aa26.02■■□□□ 1.76
PTCH1-210ENST00000468211 NR1H3Q13133 447 aa26.02■■□□□ 1.76
PTCH1-210ENST00000468211 PSMD2Q13200 908 aa26.02■■□□□ 1.76
PTCH1-210ENST00000468211 FAM35AQ86V20 835 aa26.02■■□□□ 1.76
PTCH1-210ENST00000468211 NUP93Q8N1F7 819 aa26.02■■□□□ 1.76
PTCH1-210ENST00000468211 CAMKK1Q8N5S9 505 aa26.02■■□□□ 1.76
PTCH1-210ENST00000468211 SCAMP5Q8TAC9 235 aa26.02■■□□□ 1.76
PTCH1-210ENST00000468211 PDXKO00764 312 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 CLSTN1O94985 981 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 PRR29P0C7W0 189 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 AP3M2P53677 418 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 ORC1Q13415 861 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 CCDC6Q16204 474 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 C1orf220Q5T0J3 134 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 SYT13Q7L8C5 426 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 ACOT1Q86TX2 421 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 ADGRG2Q8IZP9 1017 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 SLITRK1Q96PX8 696 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 RTKNQ9BST9 563 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 ARRDC1-AS1Q9H2J1 176 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 CFAP97Q9P2B7 532 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 HMGXB4Q9UGU5 601 aa26.01■■□□□ 1.75
PTCH1-210ENST00000468211 CHORDC1Q9UHD1 332 aaPredicted RBP26.01■■□□□ 1.75
PTCH1-210ENST00000468211 K7EQS6 105 aa26■■□□□ 1.75
PTCH1-210ENST00000468211 TNFRSF10BO14763 440 aa26■■□□□ 1.75
PTCH1-210ENST00000468211 YWHAQP27348 245 aa26■■□□□ 1.75
PTCH1-210ENST00000468211 MESP2Q0VG99 397 aa26■■□□□ 1.75
PTCH1-210ENST00000468211 DMC1Q14565 340 aa26■■□□□ 1.75
PTCH1-210ENST00000468211 ZACNQ401N2 412 aa26■■□□□ 1.75
PTCH1-210ENST00000468211 CACNA2D4Q7Z3S7 1137 aa26■■□□□ 1.75
PTCH1-210ENST00000468211 SFTPA1Q8IWL2 248 aa26■■□□□ 1.75
PTCH1-210ENST00000468211 FUKQ8N0W3 1084 aa26■■□□□ 1.75
PTCH1-210ENST00000468211 EXOC4Q96A65 974 aa26■■□□□ 1.75
PTCH1-210ENST00000468211 SPATA32Q96LK8 384 aa26■■□□□ 1.75
PTCH1-210ENST00000468211 MED10Q9BTT4 135 aa26■■□□□ 1.75
PTCH1-210ENST00000468211 RPN1P04843 607 aaKnown RBP25.99■■□□□ 1.75
PTCH1-210ENST00000468211 CCDC192P0DO97 292 aa25.99■■□□□ 1.75
PTCH1-210ENST00000468211 DHCR24Q15392 516 aa25.99■■□□□ 1.75
PTCH1-210ENST00000468211 SF3A2Q15428 464 aaKnown RBP25.99■■□□□ 1.75
PTCH1-210ENST00000468211 SPOPLQ6IQ16 392 aa25.99■■□□□ 1.75
PTCH1-210ENST00000468211 SV2AQ7L0J3 742 aa25.99■■□□□ 1.75
PTCH1-210ENST00000468211 NETO1Q8TDF5 533 aa25.99■■□□□ 1.75
PTCH1-210ENST00000468211 TMC2Q8TDI7 906 aa25.99■■□□□ 1.75
PTCH1-210ENST00000468211 FBXO32Q969P5 355 aa25.99■■□□□ 1.75
PTCH1-210ENST00000468211 ZFRQ96KR1 1074 aaKnown RBP25.99■■□□□ 1.75
PTCH1-210ENST00000468211 IL37Q9NZH6 218 aa25.99■■□□□ 1.75
PTCH1-210ENST00000468211 USP25Q9UHP3 1055 aa25.99■■□□□ 1.75
PTCH1-210ENST00000468211 ABCA7Q8IZY2 2146 aa25.99■■□□□ 1.75
PTCH1-210ENST00000468211 SLC30A4O14863 429 aa25.98■■□□□ 1.75
PTCH1-210ENST00000468211 COCHO43405 550 aa25.98■■□□□ 1.75
PTCH1-210ENST00000468211 BEST1O76090 585 aa25.98■■□□□ 1.75
PTCH1-210ENST00000468211 RTN3O95197 1032 aaPredicted RBP25.98■■□□□ 1.75
PTCH1-210ENST00000468211 MBL2P11226 248 aaPredicted RBP25.98■■□□□ 1.75
PTCH1-210ENST00000468211 CCDC130P13994 396 aa25.98■■□□□ 1.75
PTCH1-210ENST00000468211 SLC6A11P48066 632 aa25.98■■□□□ 1.75
PTCH1-210ENST00000468211 PGFP49763 221 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms