RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 CXCL16Q9H2A7 254 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 LRRC4Q9HBW1 653 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 CNGB3Q9NQW8 809 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 FAM49BQ9NUQ9 324 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 RCOR3Q9P2K3 495 aaPredicted RBP10.68□□□□□ -0.7
MSH5-213ENST00000468136 OGDHLQ9ULD0 1010 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 PCDHB8Q9UN66 801 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 CFAP69A5D8W1 941 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 GOLGA6L10A6NI86 522 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 APOC4-APOC2K7ER74 178 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 SYN3O14994 580 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 PAPSS1O43252 624 aaPredicted RBP10.67□□□□□ -0.7
MSH5-213ENST00000468136 DAPK3O43293 454 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 MGEA5O60502 916 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 PPFIA2O75334 1257 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 DAB1O75553 588 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 B3GAT3O94766 335 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 APOC2P02655 101 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 MYBL2P10244 700 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 YY1P25490 414 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 LMO2P25791 158 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 STIP1P31948 543 aaKnown RBP10.67□□□□□ -0.7
MSH5-213ENST00000468136 NOS2P35228 1153 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 MATKP42679 507 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 CLCNKBP51801 687 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 SMARCB1Q12824 385 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 ELAVL2Q12926 359 aaKnown RBP10.67□□□□□ -0.7
MSH5-213ENST00000468136 ORC1Q13415 861 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 BYSLQ13895 437 aaKnown RBP10.67□□□□□ -0.7
MSH5-213ENST00000468136 NOMO2Q5JPE7 1267 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 C1orf53Q5VUE5 145 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 LLGL2Q6P1M3 1020 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 FAM171BQ6P995 826 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 MFSD7Q6UXD7 560 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 C4orf50Q6ZRC1 276 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 BZW1Q7L1Q6 419 aaKnown RBP10.67□□□□□ -0.7
MSH5-213ENST00000468136 FAM126BQ8IXS8 530 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 FUKQ8N0W3 1084 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 IQCKQ8N0W5 287 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 SIX6OS1Q8N1H7 587 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 HAUS1Q96CS2 278 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 SNF8Q96H20 258 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 TOX2Q96NM4 488 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 FAM193BQ96PV7 902 aaPredicted RBP10.67□□□□□ -0.7
MSH5-213ENST00000468136 SLC9A7Q96T83 725 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 ZNF670Q9BS34 389 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 MED10Q9BTT4 135 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 MRPL9Q9BYD2 267 aaKnown RBP10.67□□□□□ -0.7
MSH5-213ENST00000468136 GOLGA2P5Q9HBQ8 144 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 MIOSQ9NXC5 875 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.67□□□□□ -0.7
MSH5-213ENST00000468136 PTPN22Q9Y2R2 807 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 NR2E1Q9Y466 385 aa10.67□□□□□ -0.7
MSH5-213ENST00000468136 LIASO43766 372 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 F9P00740 461 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 RARGP13631 454 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 CCDC130P13994 396 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 ATF2P15336 505 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 TGM2P21980 687 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 ADORA2BP29275 332 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 ECHS1P30084 290 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 VCPP55072 806 aaKnown RBP10.66□□□□□ -0.7
MSH5-213ENST00000468136 MRPS5P82675 430 aaKnown RBP10.66□□□□□ -0.7
MSH5-213ENST00000468136 DSC1Q08554 894 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 NFE2Q16621 373 aaPredicted RBP10.66□□□□□ -0.7
MSH5-213ENST00000468136 SLC25A52Q3SY17 297 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 CCDC14Q49A88 953 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 PLEKHG4Q58EX7 1191 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 INTS6LQ5JSJ4 861 aaKnown RBP10.66□□□□□ -0.7
MSH5-213ENST00000468136 AADACL2Q6P093 401 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 TRMT10CQ7L0Y3 403 aaKnown RBP10.66□□□□□ -0.7
MSH5-213ENST00000468136 ADAT2Q7Z6V5 191 aaKnown RBP10.66□□□□□ -0.7
MSH5-213ENST00000468136 PIGZQ86VD9 579 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 OSTM1Q86WC4 334 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 DCP1BQ8IZD4 617 aaKnown RBP10.66□□□□□ -0.7
MSH5-213ENST00000468136 ZDHHC14Q8IZN3 488 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 ABI1Q8IZP0 508 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 CNPY4Q8N129 248 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 LPPQ93052 612 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 ART4Q93070 314 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
MSH5-213ENST00000468136 SH3GL2Q99962 352 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 TMEM175Q9BSA9 504 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 TRPV6Q9H1D0 765 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 DPEP3Q9H4B8 488 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 CSNK1G1Q9HCP0 422 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 ZDHHC18Q9NUE0 388 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 ASIC3Q9UHC3 531 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 NME7Q9Y5B8 376 aa10.66□□□□□ -0.7
MSH5-213ENST00000468136 ESYT3A0FGR9 886 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 CASTOR2A6NHX0 329 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 C3orf70A6NLC5 250 aaPredicted RBP10.65□□□□□ -0.7
MSH5-213ENST00000468136 SPDYE4A6NLX3 237 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 DCDC2CA8MYV0 355 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 MCF2LO15068 1137 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 GJB6O95452 261 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 OAS2P29728 719 aaKnown RBP10.65□□□□□ -0.7
MSH5-213ENST00000468136 RFC2P35250 354 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 FLT3P36888 993 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 NR2C2P49116 596 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms